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IPR040251

Source: InterPro

Description

IPR040251 is a Protein transport protein SEC31-like.

<p>This entry contains proteins with WD40 repeats and includes protein transport protein SEC31, which is a component of the coat protein complex II (COPII). COPII promotes the formation of transport vesicles from the endoplasmic reticulum by deformating the endoplasmic reticulum membrane into vesicles and selectiing cargo molecules [[cite:PUB00090763]]. In humans and other mammals, there are two SEC31 proteins known as SEC31A and SEC31B [[cite:PUB00090764]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0006888
Biological process ER to Golgi vesicle-mediated transport The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi.
Subterm of

Associated Lotus transcripts 2

Transcript Name Description Predicted domains Domain count
LotjaGi3g1v0518800_LC.2
– WD-repeat protein, putative; TAIR: AT3G63460.1 transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q8L611|SC31B_ARATH Protein transport protein SEC31 homolog B; TrEMBL-Plants: tr|A0A1J7GGU9|A0A1J7GGU9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0518800_LC
Domains
18
LotjaGi3g1v0547100.1
– Protein transport protein SEC31; TAIR: AT3G63460.1 transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q8L611|SC31B_ARATH Protein transport protein SEC31 homolog B; TrEMBL-Plants: tr|A0A0L9V8D0|A0A0L9V8D0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0547100
Domains
19

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 50.00