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GO:0006888

View this GO term in other databases

Overview

Field Value
Namespace Biological process
Short description ER to Golgi vesicle-mediated transport
Full defintion The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi.
Subterm of

Relationships

The relationship of GO:0006888 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

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Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOCtb
ISBN

· ISBN: 0716731363

, · pages

Associated Lotus transcripts 62

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
Lj0g3v0033089.1
– PREDICTED: Golgi SNAP receptor complex member 1-2-like [Cicer arietinum] gi|502170517|ref|XP_004514849.1|
GO terms
4
Lj0g3v0102499.1
– PREDICTED: protein YIF1B-like [Cicer arietinum] gi|502148747|ref|XP_004507253.1|
GO terms
2
Lj0g3v0102499.2
– PREDICTED: protein YIF1B-like [Cicer arietinum] gi|502148747|ref|XP_004507253.1|
GO terms
2
Lj0g3v0185729.1
– PREDICTED: protein transport protein SEC23-like [Cicer arietinum] gi|502155829|ref|XP_004510207.1|
GO terms
4
Lj0g3v0201099.1
– PREDICTED: protein transport protein SEC23-like isoform 1 [Glycine max] gi|356540108|ref|XP_003538532.1|
GO terms
3
Lj0g3v0203219.1
– PREDICTED: protein transport protein Sec24-like At4g32640-like [Glycine max] gi|356534416|ref|XP_003535751.1|
GO terms
4
Lj0g3v0222659.1
– PREDICTED: protein transport protein SEC23-like [Glycine max] gi|356504446|ref|XP_003521007.1|
GO terms
3
Lj0g3v0239889.1
– PREDICTED: Golgi SNAP receptor complex member 1-2-like [Cicer arietinum] gi|502170517|ref|XP_004514849.1|
GO terms
4
Lj0g3v0242929.1
– PREDICTED: protein transport protein SEC23-like isoform X1 [Cicer arietinum] gi|502135229|ref|XP_004502262.1|
GO terms
4
Lj0g3v0332229.1
– PREDICTED: protein transport protein SEC23-like isoform X1 [Cicer arietinum] gi|502135095|ref|XP_004502219.1|
GO terms
3
Lj0g3v0332229.2
– PREDICTED: protein transport protein SEC23-like isoform X1 [Cicer arietinum] gi|502135095|ref|XP_004502219.1|
GO terms
3
Lj0g3v0344259.1
– Protein transport protein SEC23 [Medicago truncatula] gi|357513131|ref|XP_003626854.1|
GO terms
3
Lj1g3v1363170.1
– PREDICTED: trafficking protein particle complex subunit 2-like [Cicer arietinum] gi|502137185|ref|XP_004502999.1|
GO terms
1
Lj1g3v1363170.2
– PREDICTED: trafficking protein particle complex subunit 2-like [Cicer arietinum] gi|502137185|ref|XP_004502999.1|
GO terms
1
Lj1g3v1486180.1
– PREDICTED: trafficking protein particle complex subunit 2-like [Cicer arietinum] gi|502137185|ref|XP_004502999.1|
GO terms
1
Lj1g3v2897290.1
– PREDICTED: trafficking protein particle complex subunit 2-like protein-like [Glycine max] gi|356568553|ref|XP_003552475.1|
GO terms
1
Lj1g3v3103940.1
– Protein YIF1B-B [Medicago truncatula] gi|357502653|ref|XP_003621615.1|
GO terms
2
Lj1g3v3103940.2
– Protein YIF1B-B [Medicago truncatula] gi|357502653|ref|XP_003621615.1|
GO terms
2
Lj1g3v4804040.1
– PREDICTED: protein transport protein Sec24-like At3g07100-like [Cicer arietinum] gi|502113027|ref|XP_004494519.1|
GO terms
4
Lj1g3v4830280.1
– PREDICTED: protein transport protein Sec23A-like [Glycine max] gi|356572844|ref|XP_003554575.1|
GO terms
4
Lj3g3v2169480.1
– PREDICTED: Golgi SNARE 11 protein-like [Glycine max] gi|356526250|ref|XP_003531731.1|
GO terms
4
Lj3g3v2993440.1
– PREDICTED: protein transport protein SEC24-1-like [Glycine max] gi|356542764|ref|XP_003539835.1|
GO terms
3
Lj4g3v2576080.1
– PREDICTED: protein transport protein Sec23A-like [Cicer arietinum] gi|502135226|ref|XP_004502261.1|
GO terms
3
Lj4g3v2576090.1
– Protein transport protein Sec23 [Medicago truncatula] gi|357462887|ref|XP_003601725.1|
GO terms
4
Lj5g3v2241210.1
– PREDICTED: protein transport protein Sec24-like At4g32640-like [Glycine max] gi|356534416|ref|XP_003535751.1|
GO terms
4
Lj5g3v2241210.2
– PREDICTED: protein transport protein Sec24-like At4g32640-like [Glycine max] gi|356534416|ref|XP_003535751.1|
GO terms
4
LotjaGi1g1v0326200.1
– Trafficking protein particle complex subunit 2; TAIR: AT1G80500.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q3T0F2|TPPC2_BOVIN Trafficking protein particle complex subunit 2; TrEMBL-Plants: tr|I3SKY8|I3SKY8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0326200
GO terms
1
LotjaGi1g1v0326200.2
– Trafficking protein particle complex subunit 2; TAIR: AT1G80500.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q3T0F2|TPPC2_BOVIN Trafficking protein particle complex subunit 2; TrEMBL-Plants: tr|I3SKY8|I3SKY8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0326200
GO terms
1
LotjaGi1g1v0326200.3
– Trafficking protein particle complex subunit 2; TAIR: AT1G80500.1 SNARE-like superfamily protein; Swiss-Prot: sp|P0DI81|TPC2A_HUMAN Trafficking protein particle complex subunit 2; TrEMBL-Plants: tr|A0A151T4B6|A0A151T4B6_CAJCA Trafficking protein particle complex subunit 2; Found in the gene: LotjaGi1g1v0326200
GO terms
1
LotjaGi1g1v0335900.1
– Trafficking protein particle complex subunit 2; TAIR: AT1G80500.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q3T0F2|TPPC2_BOVIN Trafficking protein particle complex subunit 2; TrEMBL-Plants: tr|A0A0L9UER7|A0A0L9UER7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0335900
GO terms
1
LotjaGi1g1v0335900.2
– Trafficking protein particle complex subunit 2; TAIR: AT1G80500.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q3T0F2|TPPC2_BOVIN Trafficking protein particle complex subunit 2; TrEMBL-Plants: tr|A0A0L9UER7|A0A0L9UER7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0335900
GO terms
1
LotjaGi1g1v0491600.1
– Trafficking protein particle complex subunit 2-like protein; TAIR: AT2G20930.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q54CU7|TPC2L_DICDI Trafficking protein particle complex subunit 2-like protein; TrEMBL-Plants: tr|I1N439|I1N439_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0491600
GO terms
1
LotjaGi1g1v0491600.2
– Trafficking protein particle complex subunit 2-like protein; TAIR: AT2G20930.1 SNARE-like superfamily protein; Swiss-Prot: sp|Q54CU7|TPC2L_DICDI Trafficking protein particle complex subunit 2-like protein; TrEMBL-Plants: tr|G7KTB1|G7KTB1_MEDTR Trafficking protein particle complex subunit-like protein; Found in the gene: LotjaGi1g1v0491600
GO terms
1
LotjaGi1g1v0523900.1
– Integral membrane HRF1 family protein; TAIR: AT1G30890.1 Integral membrane HRF1 family protein; Swiss-Prot: sp|Q6GN58|YF1BA_XENLA Protein YIF1B-A; TrEMBL-Plants: tr|G7KSU9|G7KSU9_MEDTR Integral membrane HRF1 family protein; Found in the gene: LotjaGi1g1v0523900
GO terms
2
LotjaGi1g1v0523900.2
– Integral membrane HRF1 family protein; TAIR: AT1G30890.1 Integral membrane HRF1 family protein; Swiss-Prot: sp|Q6GN58|YF1BA_XENLA Protein YIF1B-A; TrEMBL-Plants: tr|G7KSU9|G7KSU9_MEDTR Integral membrane HRF1 family protein; Found in the gene: LotjaGi1g1v0523900
GO terms
2
LotjaGi1g1v0750200.1
– Protein transport protein Sec24-like; TAIR: AT3G07100.1 Sec23/Sec24 protein transport family protein; Swiss-Prot: sp|Q9SFU0|SC24A_ARATH Protein transport protein Sec24-like At3g07100; TrEMBL-Plants: tr|I1NBN5|I1NBN5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0750200
GO terms
4
LotjaGi1g1v0750200.2
– Protein transport protein Sec24-like; TAIR: AT3G07100.1 Sec23/Sec24 protein transport family protein; Swiss-Prot: sp|Q9SFU0|SC24A_ARATH Protein transport protein Sec24-like At3g07100; TrEMBL-Plants: tr|K7N2I3|K7N2I3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0750200
GO terms
3
LotjaGi1g1v0750200.3
– Protein transport protein Sec24-like; TAIR: AT3G07100.1 Sec23/Sec24 protein transport family protein; Swiss-Prot: sp|Q9SFU0|SC24A_ARATH Protein transport protein Sec24-like At3g07100; TrEMBL-Plants: tr|I1NBN5|I1NBN5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0750200
GO terms
4
LotjaGi1g1v0754600.3
– Protein transport protein SEC23; TAIR: AT4G01810.1 Sec23/Sec24 protein transport family protein; Swiss-Prot: sp|Q0US25|SEC23_PHANO Protein transport protein SEC23; TrEMBL-Plants: tr|K7MZM9|K7MZM9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0754600
GO terms
4
LotjaGi1g1v0754600.4
– Protein transport protein SEC23; TAIR: AT4G01810.1 Sec23/Sec24 protein transport family protein; Swiss-Prot: sp|Q0US25|SEC23_PHANO Protein transport protein SEC23; TrEMBL-Plants: tr|K7MZM9|K7MZM9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0754600
GO terms
4
LotjaGi1g1v0754600.5
– Protein transport protein SEC23; TAIR: AT4G01810.1 Sec23/Sec24 protein transport family protein; Swiss-Prot: sp|Q0US25|SEC23_PHANO Protein transport protein SEC23; TrEMBL-Plants: tr|A0A151TXC4|A0A151TXC4_CAJCA Protein transport protein Sec23A; Found in the gene: LotjaGi1g1v0754600
GO terms
4
LotjaGi2g1v0059400.1
– Integral membrane HRF1 family protein; TAIR: AT1G30890.1 Integral membrane HRF1 family protein; Swiss-Prot: sp|Q6GN58|YF1BA_XENLA Protein YIF1B-A; TrEMBL-Plants: tr|I3SF42|I3SF42_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0059400
GO terms
2
LotjaGi2g1v0059400.2
– Integral membrane HRF1 family protein; TAIR: AT1G30890.1 Integral membrane HRF1 family protein; Swiss-Prot: sp|Q6GN58|YF1BA_XENLA Protein YIF1B-A; TrEMBL-Plants: tr|I3SF42|I3SF42_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0059400
GO terms
2
LotjaGi2g1v0059400.3
– Integral membrane HRF1 family protein; TAIR: AT1G30890.1 Integral membrane HRF1 family protein; Swiss-Prot: sp|Q6GN58|YF1BA_XENLA Protein YIF1B-A; TrEMBL-Plants: tr|I3SF42|I3SF42_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0059400
GO terms
2
LotjaGi2g1v0059400.4
– Protein YIF1B; TAIR: AT3G59500.1 Integral membrane HRF1 family protein; Swiss-Prot: sp|Q4FZQ0|YF1BB_XENLA Protein YIF1B-B; TrEMBL-Plants: tr|I3SF42|I3SF42_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0059400
GO terms
2
LotjaGi3g1v0207700.1
– Golgi SNAP receptor complex member 1; TAIR: AT2G45200.1 golgi snare 12; Swiss-Prot: sp|O22151|GOS12_ARATH Golgi SNAP receptor complex member 1-2; TrEMBL-Plants: tr|I3SFT9|I3SFT9_LOTJA Golgi SNAP receptor complex member 1; Found in the gene: LotjaGi3g1v0207700
GO terms
4
LotjaGi3g1v0207700.2
– Golgi SNAP receptor complex member 1; TAIR: AT2G45200.1 golgi snare 12; Swiss-Prot: sp|O22151|GOS12_ARATH Golgi SNAP receptor complex member 1-2; TrEMBL-Plants: tr|I3SFT9|I3SFT9_LOTJA Golgi SNAP receptor complex member 1; Found in the gene: LotjaGi3g1v0207700
GO terms
4
LotjaGi3g1v0207700.3
– Golgi SNAP receptor complex member 1; TAIR: AT2G45200.1 golgi snare 12; Swiss-Prot: sp|O22151|GOS12_ARATH Golgi SNAP receptor complex member 1-2; TrEMBL-Plants: tr|I3SFT9|I3SFT9_LOTJA Golgi SNAP receptor complex member 1; Found in the gene: LotjaGi3g1v0207700
GO terms
4
LotjaGi3g1v0268900.2
– Protein transport protein SEC23; TAIR: AT2G21630.1 Sec23/Sec24 protein transport family protein; Swiss-Prot: sp|Q4PE39|SEC23_USTMA Protein transport protein SEC23; TrEMBL-Plants: tr|G7LEA6|G7LEA6_MEDTR Protein transporter Sec23-like protein; Found in the gene: LotjaGi3g1v0268900
GO terms
4
LotjaGi3g1v0268900.3
– Protein transport protein SEC23; TAIR: AT2G21630.1 Sec23/Sec24 protein transport family protein; Swiss-Prot: sp|Q4PE39|SEC23_USTMA Protein transport protein SEC23; TrEMBL-Plants: tr|G7LEA6|G7LEA6_MEDTR Protein transporter Sec23-like protein; Found in the gene: LotjaGi3g1v0268900
GO terms
4
LotjaGi3g1v0351000.1
– Golgi SNAP receptor complex member 1; TAIR: AT1G15880.1 golgi snare 11; Swiss-Prot: sp|Q9LMP7|GOS11_ARATH Golgi SNAP receptor complex member 1-1; TrEMBL-Plants: tr|I3SYN2|I3SYN2_LOTJA Golgi SNAP receptor complex member 1; Found in the gene: LotjaGi3g1v0351000
GO terms
4
LotjaGi3g1v0351000.2
– Golgi SNAP receptor complex member 1; TAIR: AT1G15880.1 golgi snare 11; Swiss-Prot: sp|Q9LMP7|GOS11_ARATH Golgi SNAP receptor complex member 1-1; TrEMBL-Plants: tr|I3SYN2|I3SYN2_LOTJA Golgi SNAP receptor complex member 1; Found in the gene: LotjaGi3g1v0351000
GO terms
4
LotjaGi3g1v0476600.1
– Protein transport protein Sec24-like; TAIR: AT2G27460.1 sec23/sec24 transport family protein; Swiss-Prot: sp|Q875V8|SC241_NAUCC Protein transport protein SEC24-1; TrEMBL-Plants: tr|I1LRH3|I1LRH3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0476600
GO terms
4
LotjaGi3g1v0518800_LC.2
– WD-repeat protein, putative; TAIR: AT3G63460.1 transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q8L611|SC31B_ARATH Protein transport protein SEC31 homolog B; TrEMBL-Plants: tr|A0A1J7GGU9|A0A1J7GGU9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0518800_LC
GO terms
1
LotjaGi3g1v0547100.1
– Protein transport protein SEC31; TAIR: AT3G63460.1 transducin family protein / WD-40 repeat family protein; Swiss-Prot: sp|Q8L611|SC31B_ARATH Protein transport protein SEC31 homolog B; TrEMBL-Plants: tr|A0A0L9V8D0|A0A0L9V8D0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0547100
GO terms
1
LotjaGi4g1v0368900.1
– Protein transport protein SEC23; TAIR: AT1G05520.1 Sec23/Sec24 protein transport family protein; Swiss-Prot: sp|Q4PE39|SEC23_USTMA Protein transport protein SEC23; TrEMBL-Plants: tr|A0A1J7GI99|A0A1J7GI99_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0368900
GO terms
4
LotjaGi4g1v0368900.2
– Protein transport protein SEC23; TAIR: AT1G05520.1 Sec23/Sec24 protein transport family protein; Swiss-Prot: sp|Q4PE39|SEC23_USTMA Protein transport protein SEC23; TrEMBL-Plants: tr|A0A1J7GI99|A0A1J7GI99_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0368900
GO terms
4
LotjaGi5g1v0346900.1
– Protein transport protein Sec24-like family; TAIR: AT4G32640.1 Sec23/Sec24 protein transport family protein; Swiss-Prot: sp|Q9M081|SC24B_ARATH Protein transport protein Sec24-like At4g32640; TrEMBL-Plants: tr|A0A151TQ51|A0A151TQ51_CAJCA Protein transport protein Sec24-like family; Found in the gene: LotjaGi5g1v0346900
GO terms
4
LotjaGi5g1v0346900.2
– Protein transport protein Sec24-like family; TAIR: AT4G32640.1 Sec23/Sec24 protein transport family protein; Swiss-Prot: sp|Q9M081|SC24B_ARATH Protein transport protein Sec24-like At4g32640; TrEMBL-Plants: tr|A0A151TQ51|A0A151TQ51_CAJCA Protein transport protein Sec24-like family; Found in the gene: LotjaGi5g1v0346900
GO terms
4
LotjaGi5g1v0346900.3
– Protein transport protein Sec24-like family; TAIR: AT3G44340.1 hypothetical protein; Swiss-Prot: sp|Q9M291|SC24C_ARATH Protein transport protein Sec24-like CEF; TrEMBL-Plants: tr|A0A151TQ51|A0A151TQ51_CAJCA Protein transport protein Sec24-like family; Found in the gene: LotjaGi5g1v0346900
GO terms
3
LotjaGi6g1v0038800.1
– Protein transport protein SEC23; TAIR: AT5G43670.1 Sec23/Sec24 protein transport family protein; Swiss-Prot: sp|Q4PE39|SEC23_USTMA Protein transport protein SEC23; TrEMBL-Plants: tr|G8A123|G8A123_MEDTR Protein transporter Sec23-like protein; Found in the gene: LotjaGi6g1v0038800
GO terms
4
LotjaGi6g1v0103600.1
– Protein transport protein SEC23; TAIR: AT1G05520.1 Sec23/Sec24 protein transport family protein; Swiss-Prot: sp|Q4PE39|SEC23_USTMA Protein transport protein SEC23; TrEMBL-Plants: tr|G7JBC0|G7JBC0_MEDTR Protein transporter Sec23-like protein; Found in the gene: LotjaGi6g1v0103600
GO terms
4

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0030127
Cellular component COPII vesicle coat 1 1.61