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IPR040610 is a SNRNP25, ubiquitin-like domain.
<p>This domain has a ubiquitin-like fold found in a diverse range of proteins including RNP25 [[cite:PUB00076489]]. RNP25 is a component of the U11/U12 snRNPs that are part of the U12-type spliceosome. It contains a conserved ubiquitin-like (Ubl) domain with a β-grasp Ubl fold, a common structure involved in protein-protein interactions [[cite:PUB00096161], [cite:PUB00082764]].</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | U11/U12 small nuclear ribonucleoprotein 25 kDa protein; TAIR: AT4G32270.1 Ubiquitin-like superfamily protein; Swiss-Prot: sp|Q84WS8|U1125_ARATH U11/U12 small nuclear ribonucleoprotein 25 kDa protein; TrEMBL-Plants: tr|K7KTH6|K7KTH6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0382600 | 9 | ||
| – | U11/U12 small nuclear ribonucleoprotein 25 kDa-like protein; TAIR: AT3G07860.1 Ubiquitin-like superfamily protein; Swiss-Prot: sp|Q84WS8|U1125_ARATH U11/U12 small nuclear ribonucleoprotein 25 kDa protein; TrEMBL-Plants: tr|I3SEG9|I3SEG9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0526300 | 11 | ||
| – | U11/U12 small nuclear ribonucleoprotein 25 kDa protein; TAIR: AT4G32270.1 Ubiquitin-like superfamily protein; Swiss-Prot: sp|Q84WS8|U1125_ARATH U11/U12 small nuclear ribonucleoprotein 25 kDa protein; TrEMBL-Plants: tr|I3T5J9|I3T5J9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0059700 | 12 | ||
| – | U11/U12 small nuclear ribonucleoprotein 25 kDa protein; TAIR: AT4G32270.1 Ubiquitin-like superfamily protein; Swiss-Prot: sp|Q84WS8|U1125_ARATH U11/U12 small nuclear ribonucleoprotein 25 kDa protein; TrEMBL-Plants: tr|I3T5J9|I3T5J9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0059700 | 12 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 25.00 |