Domain Predictions — View

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IPR041702

Source: InterPro

Description

IPR041702 is a Magnesium-chelatase BchD/ChlD, VWA domain.

<p>Magnesium chelatase catalyses the insertion of Mg into protoporphyrin IX (Proto). In chlorophyll biosynthesis, insertion of Mg2+ into protoporphyrin IX is catalysed by magnesium chelatase in an ATP-dependent reaction. The Mg-chelatase subunits are designated ChlI, ChlD and ChlH in plants and BchI, BchD and BchH in bacteriochlorophyll synthesis. BchD contains a AAA domain at its N terminus and a VWA domain at its C terminus. The VWA domain has been speculated to be involved in mediating protein-protein interactions. This entry represents the VWA domain found in bacterial BchD and plant ChlD [[cite:PUB00011189], [cite:PUB00091697]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 3

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi2g1v0443300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Mg-protoporphyrin IX chelatase; TAIR: AT1G08520.1 ALBINA 1; Swiss-Prot: sp\|O22437\|CHLD_PEA Magnesium-chelatase subunit ChlD, chloroplastic; TrEMBL-Plants: tr\|A0A1J7G395\|A0A1J7G395_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0443300	Domains Coil G3DSA:1.10.8.80 G3DSA:3.40.50.300 G3DSA:3.40.50.410 IPR000523 IPR002035 IPR003593 IPR011776 IPR027417 IPR036465 IPR041628 IPR041702 NON_CYTOPLASMIC_DOMAIN PF01078 PF13519 PF17863 PS50234 PTHR43473 PTHR43473:SF2 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00327 SM00382 SSF52540 SSF53300 TIGR02031 cd00009 cd01451 cd17706 mobidb-lite	32
LotjaGi2g1v0443300.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Mg-protoporphyrin IX chelatase; TAIR: AT1G08520.1 ALBINA 1; Swiss-Prot: sp\|O22437\|CHLD_PEA Magnesium-chelatase subunit ChlD, chloroplastic; TrEMBL-Plants: tr\|A0A1J7G395\|A0A1J7G395_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0443300	Domains Coil G3DSA:1.10.8.80 G3DSA:3.40.50.300 G3DSA:3.40.50.410 IPR000523 IPR002035 IPR011776 IPR027417 IPR036465 IPR041628 IPR041702 PF01078 PF13519 PF17863 PS50234 PTHR43473 PTHR43473:SF2 SM00327 SSF52540 SSF53300 TIGR02031 cd01451 cd17706 mobidb-lite	24
LotjaGi2g1v0443300.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Mg-protoporphyrin IX chelatase; TAIR: AT1G08520.1 ALBINA 1; Swiss-Prot: sp\|O22437\|CHLD_PEA Magnesium-chelatase subunit ChlD, chloroplastic; TrEMBL-Plants: tr\|A0A1J7G395\|A0A1J7G395_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0443300	Domains Coil G3DSA:1.10.8.80 G3DSA:3.40.50.300 G3DSA:3.40.50.410 IPR000523 IPR002035 IPR011776 IPR027417 IPR036465 IPR041628 IPR041702 PF01078 PF13519 PF17863 PS50234 PTHR43473 PTHR43473:SF2 SM00327 SSF52540 SSF53300 TIGR02031 cd01451 cd17706 mobidb-lite	24

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	33.33