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IPR041997

Source: InterPro

Description

IPR041997 is a Large ribosomal subunit protein eL6, KOW domain.

<p>Large ribosomal subunit protein eL6 (RPL6) contains a KOW motif and has an extra ribosomal role regulating the DNA damage response [[cite:PUB00092189]]. KOW domain is known as an RNA-binding motif that is shared so far among some families of ribosomal proteins, the essential bacterial transcriptional elongation factor NusG, the eukaryotic chromatin elongation factor Spt5, the higher eukaryotic KIN17 proteins and Mtr4 [[cite:PUB00005458]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 4

Transcript Name Description Predicted domains Domain count
LotjaGi1g1v0312000.1
– 60S ribosomal L6-like protein; TAIR: AT1G74050.1 Ribosomal protein L6 family protein; Swiss-Prot: sp|P34091|RL6_MESCR 60S ribosomal protein L6; TrEMBL-Plants: tr|B7FH28|B7FH28_MEDTR 60S ribosomal L6-like protein; Found in the gene: LotjaGi1g1v0312000
Domains
13
LotjaGi3g1v0124700.1
– 60S ribosomal L6-like protein; TAIR: AT1G74050.1 Ribosomal protein L6 family protein; Swiss-Prot: sp|P34091|RL6_MESCR 60S ribosomal protein L6; TrEMBL-Plants: tr|B7FH81|B7FH81_MEDTR Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0124700
Domains
14
LotjaGi3g1v0124700.2
– 60S ribosomal L6-like protein; TAIR: AT1G74050.1 Ribosomal protein L6 family protein; Swiss-Prot: sp|P34091|RL6_MESCR 60S ribosomal protein L6; TrEMBL-Plants: tr|B7FH81|B7FH81_MEDTR Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0124700
Domains
14
LotjaGi4g1v0403300.1
– 60S ribosomal protein L6; TAIR: AT1G74050.1 Ribosomal protein L6 family protein; Swiss-Prot: sp|P34091|RL6_MESCR 60S ribosomal protein L6; TrEMBL-Plants: tr|I3S6L4|I3S6L4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0403300
Domains
13

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 25.00