Domain Predictions — View

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MF_01161

Source: Hamap

Description

tRNA(Ile)-lysidine synthase [tilS].

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0000166 View details of GO:0000166 AmiGO InterPro QuickGO	Molecular function	Nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.	Subterm of GO:0036094 GO:1901265
GO:0005524 View details of GO:0005524 AmiGO InterPro QuickGO	Molecular function	ATP binding	Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.	Subterm of GO:0008144 GO:0032559 GO:0035639
GO:0008033 View details of GO:0008033 AmiGO InterPro QuickGO	Biological process	TRNA processing	The process in which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group.	Subterm of GO:0006399 GO:0034470
GO:0016879 View details of GO:0016879 AmiGO InterPro QuickGO	Molecular function	Ligase activity, forming carbon-nitrogen bonds	Catalysis of the joining of two molecules, or two groups within a single molecule, via a carbon-nitrogen bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.	Subterm of GO:0016874

Associated Lotus transcripts 2

Transcript	Name	Description	Predicted domains	Domain count
Lj2g3v0795760.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	TRNA(Ile)-lysidine synthase [Medicago truncatula] gi\|357500613\|ref\|XP_003620595.1\|	Domains G3DSA:3.40.50.620 IPR011063 IPR012094 IPR012795 IPR014729 MF_01161 NON_CYTOPLASMIC_DOMAIN PF01171 PTHR11807 PTHR11807:SF2 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF52402 SignalP-TM_GRAM_POSITIVE TIGR02432 cd01992	18
LotjaGi2g1v0217600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	TRNA(Ile)-lysidine synthase; TAIR: AT3G24560.2 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp\|B3CLY6\|TILS_WOLPP tRNA(Ile)-lysidine synthase; TrEMBL-Plants: tr\|K7L0G6\|K7L0G6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0217600	Domains G3DSA:3.40.50.620 IPR011063 IPR012094 IPR012795 IPR014729 MF_01161 NON_CYTOPLASMIC_DOMAIN PF01171 PTHR43033 PTHR43033:SF4 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF52402 SignalP-TM TIGR02432 cd01992	18

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd01992	CDD	1	50.00