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PD024971

Source: ProDom

Description

HELICASE ATP-BINDING NUCLEOTIDE-BINDING HYDROLASE RNA ATP-DEPENDENT BOX DEAD HELICASE 3.6.1.-

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003723
Molecular function RNA binding Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
Subterm of
GO:0003724
Molecular function RNA helicase activity Catalysis of the reaction: NTP + H2O = NDP + phosphate, to drive the unwinding of a RNA helix.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0005634
Cellular component Nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
Subterm of

Associated Lotus transcripts 4

Transcript Name Description Predicted domains Domain count
Lj0g3v0246069.1
– Dead box ATP-dependent RNA helicase isoform 2 [Theobroma cacao] gi|508724625|gb|EOY16522.1|
Domains
23
Lj3g3v0461250.1
– Dead box ATP-dependent RNA helicase isoform 1 [Theobroma cacao] gi|508724624|gb|EOY16521.1|
Domains
23
Lj3g3v0461250.2
– Dead box ATP-dependent RNA helicase isoform 2 [Theobroma cacao] gi|508724625|gb|EOY16522.1|
Domains
25
Lj3g3v0461250.3
– Dead box ATP-dependent RNA helicase isoform 1 [Theobroma cacao] gi|508724624|gb|EOY16521.1|
Domains
5

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 25.00