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GO:1990904

View this GO term in other databases

Overview

Field Value
Namespace Cellular component
Short description Ribonucleoprotein complex
Full defintion A macromolecular complex containing both protein and RNA molecules.
Subterm of

Relationships

The relationship of GO:1990904 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

A force layout showing the ancestor tree for GO:1990904, and its immediate children. If you wish to explore the tree dynamically, please use the GO Explorer.

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Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOCvesicles

Associated Lotus transcripts 23

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
Lj0g3v0120989.1
– PREDICTED: NHP2-like protein 1-like [Cicer arietinum] gi|502087441|ref|XP_004488534.1|
GO terms
2
Lj0g3v0282859.1
– PREDICTED: la-related protein 7-like [Cicer arietinum] gi|502078710|ref|XP_004486031.1|
GO terms
4
Lj1g3v0672680.1
– PREDICTED: NHP2-like protein 1-like [Cicer arietinum] gi|502087441|ref|XP_004488534.1|
GO terms
2
Lj1g3v2038800.1
– PREDICTED: la-related protein 7-like [Cicer arietinum] gi|502124330|ref|XP_004498482.1|
GO terms
4
Lj1g3v2050880.1
– PREDICTED: lupus La protein homolog A-like [Glycine max] gi|356515577|ref|XP_003526475.1|
GO terms
4
Lj1g3v4764260.1
– PREDICTED: CUGBP Elav-like family member 4-like isoform X2 [Cicer arietinum] gi|502112389|ref|XP_004494315.1|
GO terms
2
Lj1g3v5062760.1
– PREDICTED: la-related protein 7-like [Cucumis sativus] gi|449492647|ref|XP_004159060.1|
GO terms
4
Lj3g3v0850580.1
– La-related protein [Medicago truncatula] gi|357447339|ref|XP_003593945.1|
GO terms
4
Lj4g3v0620300.2
– Poly(A)-binding protein [Medicago truncatula] gi|357475273|ref|XP_003607922.1|
GO terms
2
Lj4g3v0620300.3
– PREDICTED: polyadenylate-binding protein 2-like [Glycine max] gi|356499763|ref|XP_003518706.1|
GO terms
2
Lj6g3v1934050.1
– PREDICTED: la-related protein 7-like [Cicer arietinum] gi|502078710|ref|XP_004486031.1|
GO terms
4
LotjaGi1g1v0200100.1
– Ribosomal protein l7ae; TAIR: AT4G22380.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; Swiss-Prot: sp|Q5XH16|NH2L1_XENLA NHP2-like protein 1; TrEMBL-Plants: tr|I3SXG0|I3SXG0_MEDTR Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; Found in the gene: LotjaGi1g1v0200100
GO terms
2
LotjaGi1g1v0400000.1
– La protein like; TAIR: AT4G32720.2 La protein 1; Swiss-Prot: sp|Q93ZV7|LA1_ARATH La protein 1; TrEMBL-Plants: tr|I1K995|I1K995_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0400000
GO terms
4
LotjaGi1g1v0744100.1
– RNA binding protein, putative; TAIR: AT4G03110.1 RNA-binding protein-defense related 1; Swiss-Prot: sp|Q8LFS6|BRN1L_ARATH RNA-binding protein BRN1; TrEMBL-Plants: tr|A0A072UF20|A0A072UF20_MEDTR RNA-binding (RRM/RBD/RNP motif) family protein; Found in the gene: LotjaGi1g1v0744100
GO terms
2
LotjaGi1g1v0800900.1
– La; TAIR: AT2G43970.1 RNA-binding protein; Swiss-Prot: sp|O80567|LRP6B_ARATH La-related protein 6B; TrEMBL-Plants: tr|I1NCU5|I1NCU5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0800900
GO terms
4
LotjaGi2g1v0429700.1
– 60S ribosomal protein L7a; TAIR: AT3G62870.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; Swiss-Prot: sp|P35685|RL7A1_ORYSJ 60S ribosomal protein L7a-1; TrEMBL-Plants: tr|I3SHC8|I3SHC8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0429700
GO terms
2
LotjaGi2g1v0429700.2
– 60S ribosomal protein L7a; TAIR: AT2G47610.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; Swiss-Prot: sp|P49692|RL7A1_ARATH 60S ribosomal protein L7a-1; TrEMBL-Plants: tr|I3SHC8|I3SHC8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0429700
GO terms
2
LotjaGi3g1v0525500.1
– 60S ribosomal protein L7a; TAIR: AT3G62870.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; Swiss-Prot: sp|P35685|RL7A1_ORYSJ 60S ribosomal protein L7a-1; TrEMBL-Plants: tr|I3SHC8|I3SHC8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0525500
GO terms
2
LotjaGi3g1v0525800.1
– 60S ribosomal protein L7a; TAIR: AT3G62870.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; Swiss-Prot: sp|P35685|RL7A1_ORYSJ 60S ribosomal protein L7a-1; TrEMBL-Plants: tr|I3SHC8|I3SHC8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0525800
GO terms
2
LotjaGi4g1v0071000.1
– La; TAIR: AT3G19090.1 RNA-binding protein; Swiss-Prot: sp|Q9LHL3|LRP6C_ARATH La-related protein 6C; TrEMBL-Plants: tr|G7JMI2|G7JMI2_MEDTR LA-related protein 6 LA RNA-binding domain protein; Found in the gene: LotjaGi4g1v0071000
GO terms
4
LotjaGi6g1v0162200.1
– Ribosomal protein l7ae; TAIR: AT5G20160.2 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; Swiss-Prot: sp|Q5XH16|NH2L1_XENLA NHP2-like protein 1; TrEMBL-Plants: tr|I3T354|I3T354_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0162200
GO terms
2
LotjaGi6g1v0162200.2
– Ribosomal protein l7ae; TAIR: AT5G20160.2 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; Swiss-Prot: sp|Q5XH16|NH2L1_XENLA NHP2-like protein 1; TrEMBL-Plants: tr|I3T354|I3T354_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0162200
GO terms
2
LotjaGi6g1v0308500.4
– La; TAIR: AT5G46250.1 RNA-binding protein; Swiss-Prot: sp|Q94A38|LRP6A_ARATH La-related protein 6A; TrEMBL-Plants: tr|A0A151R8A3|A0A151R8A3_CAJCA La-related protein 7; Found in the gene: LotjaGi6g1v0308500
GO terms
4

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:1990904
Cellular component Ribonucleoprotein complex 1 4.35