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PF00238

Source: Pfam

Description

Ribosomal protein L14p/L23e

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003735
Molecular function Structural constituent of ribosome The action of a molecule that contributes to the structural integrity of the ribosome.
Subterm of
GO:0005840
Cellular component Ribosome An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
Subterm of
GO:0006412
Biological process Translation The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
Subterm of
Part of

Associated Lotus transcripts 18

Transcript Name Description Predicted domains Domain count
Lj0g3v0119049.1
– 60S ribosomal protein L23 [Zea mays] gi|413956981|gb|AFW89630.1|
Domains
7
Lj0g3v0292509.1
– 60S ribosomal protein L23 [Arabidopsis thaliana] gi|334185072|ref|NP_001189805.1|
Domains
10
Lj0g3v0305609.1
– PREDICTED: 50S ribosomal protein L14-like [Cicer arietinum] gi|502128525|ref|XP_004499992.1|
Domains
12
Lj0g3v0305609.2
– PREDICTED: 50S ribosomal protein L14-like [Cicer arietinum] gi|502128525|ref|XP_004499992.1|
Domains
12
Lj1g3v4516120.1
– PREDICTED: 60S ribosomal protein L23-like [Fragaria vesca subsp]. vesca] gi|470120643|ref|XP_004296407.1|
Domains
15
Lj3g3v1527580.1
– PREDICTED: 50S ribosomal protein L14-like [Vitis vinifera] gi|225443920|ref|XP_002278662.1|
Domains
6
LotjaGi1g1v0195400.1
– 50S ribosomal protein L14; TAIR: AT5G46160.2 Ribosomal protein L14p/L23e family protein; Swiss-Prot: sp|Q93Z17|HLP_ARATH 50S ribosomal protein HLP, mitochondrial; TrEMBL-Plants: tr|I3SPI5|I3SPI5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0195400
Domains
14
LotjaGi1g1v0195400.2
– 50S ribosomal protein L14; TAIR: AT5G46160.1 Ribosomal protein L14p/L23e family protein; Swiss-Prot: sp|Q93Z17|HLP_ARATH 50S ribosomal protein HLP, mitochondrial; TrEMBL-Plants: tr|I3SPI5|I3SPI5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0195400
Domains
14
LotjaGi1g1v0195400.3
– 50S ribosomal protein L14; TAIR: AT5G46160.2 Ribosomal protein L14p/L23e family protein; Swiss-Prot: sp|Q93Z17|HLP_ARATH 50S ribosomal protein HLP, mitochondrial; TrEMBL-Plants: tr|I3SPI5|I3SPI5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0195400
Domains
13
LotjaGi1g1v0705000.1
– 50S ribosomal protein L14; TAIR: AT1G04480.1 Ribosomal protein L14p/L23e family protein; Swiss-Prot: sp|P49690|RL23_ARATH 60S ribosomal protein L23; TrEMBL-Plants: tr|A0A0D3CMU0|A0A0D3CMU0_BRAOL Uncharacterized protein; Found in the gene: LotjaGi1g1v0705000
Domains
16
LotjaGi2g1v0164300.1
– 50S ribosomal protein L14; TAIR: AT1G04480.1 Ribosomal protein L14p/L23e family protein; Swiss-Prot: sp|P49690|RL23_ARATH 60S ribosomal protein L23; TrEMBL-Plants: tr|M4FGG9|M4FGG9_BRARP Uncharacterized protein; Found in the gene: LotjaGi2g1v0164300
Domains
11
LotjaGi3g1v0227900.2
– 50S ribosomal protein L16, chloroplastic; TAIR: ATCG00790.1 ribosomal protein L16 (ChrC); Swiss-Prot: sp|Q9BBP9|RK16_LOTJA 50S ribosomal protein L16, chloroplastic; TrEMBL-Plants: tr|A0A067KET2|A0A067KET2_JATCU Uncharacterized protein; Found in the gene: LotjaGi3g1v0227900
Domains
19
LotjaGi3g1v0227900.3
– 50S ribosomal protein L14, chloroplastic; TAIR: ATCG00780.1 ribosomal protein L14 (ChrC); Swiss-Prot: sp|Q9BBQ0|RK14_LOTJA 50S ribosomal protein L14, chloroplastic; TrEMBL-Plants: tr|M7ZR36|M7ZR36_TRIUA 50S ribosomal protein L14, chloroplastic; Found in the gene: LotjaGi3g1v0227900
Domains
15
LotjaGi5g1v0153700.1
– 50S ribosomal protein L14; TAIR: AT1G04480.1 Ribosomal protein L14p/L23e family protein; Swiss-Prot: sp|P49690|RL23_ARATH 60S ribosomal protein L23; TrEMBL-Plants: tr|A0A0D3CMU0|A0A0D3CMU0_BRAOL Uncharacterized protein; Found in the gene: LotjaGi5g1v0153700
Domains
16
LotjaGi6g1v0332700.2
– 50S ribosomal protein L14; TAIR: AT5G46160.1 Ribosomal protein L14p/L23e family protein; Swiss-Prot: sp|Q93Z17|HLP_ARATH 50S ribosomal protein HLP, mitochondrial; TrEMBL-Plants: tr|I3SPI5|I3SPI5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0332700
Domains
13
LotjaGi6g1v0332700.3
– 50S ribosomal protein L14; TAIR: AT5G46160.1 Ribosomal protein L14p/L23e family protein; Swiss-Prot: sp|Q93Z17|HLP_ARATH 50S ribosomal protein HLP, mitochondrial; TrEMBL-Plants: tr|I3SPI5|I3SPI5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0332700
Domains
13
LotjaGi6g1v0332700.4
– 50S ribosomal protein L14; TAIR: AT5G46160.1 Ribosomal protein L14p/L23e family protein; Swiss-Prot: sp|Q93Z17|HLP_ARATH 50S ribosomal protein HLP, mitochondrial; TrEMBL-Plants: tr|I3SPI5|I3SPI5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0332700
Domains
13
LotjaGi6g1v0332700.5
– 50S ribosomal protein L14; TAIR: AT5G46160.1 Ribosomal protein L14p/L23e family protein; Swiss-Prot: sp|Q93Z17|HLP_ARATH 50S ribosomal protein HLP, mitochondrial; TrEMBL-Plants: tr|I3SPI5|I3SPI5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0332700
Domains
13

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
TIGR01067 TIGRFAM 1 5.56