Domain Predictions — View

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PF02514

Source: Pfam

Description

CobN/Magnesium Chelatase

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0009058 View details of GO:0009058 AmiGO InterPro QuickGO	Biological process	Biosynthetic process	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.	Subterm of GO:0008152

Associated Lotus transcripts 6

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v4251210.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: magnesium-chelatase subunit H-like [Glycine max] gi\|356534764\|ref\|XP_003535922.1\|	Domains IPR003672 PF02514 PTHR23304 PTHR23304:SF115 cd10150	5
Lj1g3v4251220.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Magnesium chelatase subunit [Glycine max] gi\|351726696\|ref\|NP_001237903.1\|	Domains Coil IPR003672 IPR011771 IPR022571 PF02514 PF11965 PTHR23304 PTHR23304:SF115 TIGR02025 cd10150	10
LotjaGi1g1v0673100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Magnesium-chelatase subunit H; TAIR: AT5G13630.1 magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH); Swiss-Prot: sp\|Q9FNB0\|CHLH_ARATH Magnesium-chelatase subunit ChlH, chloroplastic; TrEMBL-Plants: tr\|I1N906\|I1N906_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0673100	Domains Coil IPR003672 IPR011771 IPR022571 PF02514 PF11965 PTHR44119 TIGR02025 cd10150	9
LotjaGi1g1v0673100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Magnesium-chelatase subunit H; TAIR: AT5G13630.1 magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH); Swiss-Prot: sp\|Q9FNB0\|CHLH_ARATH Magnesium-chelatase subunit ChlH, chloroplastic; TrEMBL-Plants: tr\|I1N906\|I1N906_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0673100	Domains Coil IPR003672 IPR011771 IPR022571 PF02514 PF11965 PTHR44119 TIGR02025 cd10150	9
LotjaGi1g1v0673100.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Magnesium-chelatase subunit H; TAIR: AT5G13630.1 magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH); Swiss-Prot: sp\|Q9FNB0\|CHLH_ARATH Magnesium-chelatase subunit ChlH, chloroplastic; TrEMBL-Plants: tr\|O65808\|O65808_SOYBN Magnesium chelatase subunit; Found in the gene: LotjaGi1g1v0673100	Domains IPR003672 IPR011771 IPR022571 PF02514 PF11965 PTHR44119 TIGR02025 cd10150	8
LotjaGi1g1v0673100.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Magnesium-chelatase subunit H; TAIR: AT5G13630.1 magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH); Swiss-Prot: sp\|Q9FNB0\|CHLH_ARATH Magnesium-chelatase subunit ChlH, chloroplastic; TrEMBL-Plants: tr\|I1N906\|I1N906_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0673100	Domains Coil IPR003672 IPR011771 IPR022571 PF02514 PF11965 PTHR44119 TIGR02025 cd10150	9

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd10150	CDD	1	16.67