Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

PF05758

Source: Pfam

Description

Ycf1

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016021
Cellular component Integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
Subterm of

Associated Lotus transcripts 6

Transcript Name Description Predicted domains Domain count
Ljchlorog3v0013250.1
– Hypothetical chloroplast RF1 [Glycine max] gi|91214199|ref|YP_538822.1|
Domains
8
Ljchlorog3v0013410.1
– Ycf1 (chloroplast) [Millettia pinnata] gi|374249593|ref|YP_005088863.1|
Domains
5
LotjaGi1g1v0660400_LC.1
– Ycf1; TAIR: ATCG01130.1 Ycf1 protein (ChrC); Swiss-Prot: sp|Q9BBN6|TI214_LOTJA Protein TIC 214; TrEMBL-Plants: tr|I3T5M7|I3T5M7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0660400_LC
Domains
8
LotjaGi2g1v0093100_LC.1
– Ycf1; TAIR: ATCG01130.1 Ycf1 protein (ChrC); Swiss-Prot: sp|Q9BBN6|TI214_LOTJA Protein TIC 214; TrEMBL-Plants: tr|I3T5M7|I3T5M7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0093100_LC
Domains
8
LotjaGi3g1v0031400.1
– Ycf1; TAIR: ATCG01130.1 Ycf1 protein (ChrC); Swiss-Prot: sp|Q9BBN6|TI214_LOTJA Protein TIC 214; TrEMBL-Plants: tr|I3T5M7|I3T5M7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0031400
Domains
8
LotjaGi3g1v0031500_LC.1
– Ycf1; TAIR: ATCG01130.1 Ycf1 protein (ChrC); Swiss-Prot: sp|Q9BBN6|TI214_LOTJA Protein TIC 214; TrEMBL-Plants: tr|A0A1C7D404|A0A1C7D404_ROBPS Hypothetical chloroplast RF19; Found in the gene: LotjaGi3g1v0031500_LC
Domains
4

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
PTHR33163:SF28 PANTHER 1 16.67