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A49-like RNA polymerase I associated factor
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Biological process | Transcription, DNA-templated | The cellular synthesis of RNA on a template of DNA. | ||
| Cellular component | Host cell nucleus | A membrane-bounded organelle as it is found in the host cell in which chromosomes are housed and replicated. The host is defined as the larger of the organisms involved in a symbiotic interaction. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: DNA-directed RNA polymerase I subunit rpa49-like [Glycine max] gi|356556228|ref|XP_003546428.1| | 3 | ||
| – | PREDICTED: DNA-directed RNA polymerase I subunit rpa49-like [Glycine max] gi|356556228|ref|XP_003546428.1| | 5 | ||
| – | DNA-directed RNA polymerase I subunit rpa49; TAIR: AT3G13940.1 DNA binding / DNA-directed RNA polymerase; Swiss-Prot: sp|O14086|RPA49_SCHPO DNA-directed RNA polymerase I subunit rpa49; TrEMBL-Plants: tr|I3SLR3|I3SLR3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0236100 | 5 | ||
| – | DNA-directed RNA polymerase I subunit rpa49; TAIR: AT3G13940.1 DNA binding / DNA-directed RNA polymerase; Swiss-Prot: sp|O14086|RPA49_SCHPO DNA-directed RNA polymerase I subunit rpa49; TrEMBL-Plants: tr|I3SLR3|I3SLR3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0236200_LC | 3 | ||
| – | DNA-directed RNA polymerase I subunit rpa49; TAIR: AT3G13940.1 DNA binding / DNA-directed RNA polymerase; Swiss-Prot: sp|O14086|RPA49_SCHPO DNA-directed RNA polymerase I subunit rpa49; TrEMBL-Plants: tr|I3SLR3|I3SLR3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0236200_LC | 3 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| PTHR14440 | PANTHER | 1 | 20.00 |