Domain Predictions — View

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PF13968

Source: Pfam

Description

Domain of unknown function (DUF4220)

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 7

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0244399.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Uncharacterized protein TCM_041206 [Theobroma cacao] gi\|508785996\|gb\|EOY33252.1\|	Domains CYTOPLASMIC_DOMAIN IPR025315 NON_CYTOPLASMIC_DOMAIN PF13968 PTHR31325 PTHR31325:SF0 TMhelix TRANSMEMBRANE	8
Lj4g3v1539290.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Uncharacterized protein TCM_041206 [Theobroma cacao] gi\|508785996\|gb\|EOY33252.1\|	Domains CYTOPLASMIC_DOMAIN IPR007658 IPR025315 NON_CYTOPLASMIC_DOMAIN PF04578 PF13968 PTHR31325 PTHR31325:SF0 TMhelix TRANSMEMBRANE	10
Lj6g3v0920310.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Os01g0798800 [Oryza sativa Japonica Group] gi\|115440491\|ref\|NP_001044525.1\|	Domains CYTOPLASMIC_DOMAIN IPR007658 IPR025315 NON_CYTOPLASMIC_DOMAIN PF04578 PF13968 PTHR31325 PTHR31325:SF1 TMhelix TRANSMEMBRANE mobidb-lite	11
Lj6g3v1048890.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Uncharacterized protein TCM_041206 [Theobroma cacao] gi\|508785996\|gb\|EOY33252.1\|	Domains CYTOPLASMIC_DOMAIN Coil IPR007658 IPR025315 NON_CYTOPLASMIC_DOMAIN PF04578 PF13968 PTHR31325 PTHR31325:SF0 TMhelix TRANSMEMBRANE	11
LotjaGi6g1v0167100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transmembrane protein, putative (DUF594); TAIR: AT5G45530.1 transmembrane protein, putative (DUF594); Swiss-Prot: sp\|A5IM44\|FLGI_THEP1 Flagellar P-ring protein; TrEMBL-Plants: tr\|V7BPD5\|V7BPD5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0167100	Domains CYTOPLASMIC_DOMAIN IPR007658 IPR025315 NON_CYTOPLASMIC_DOMAIN PF04578 PF13968 PTHR31325 PTHR31325:SF147 TMhelix TRANSMEMBRANE mobidb-lite	11
LotjaGi6g1v0199400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DUF594 family protein; TAIR: AT5G45470.1 transmembrane protein, putative (DUF594); Swiss-Prot: sp\|A5GRD7\|PNP_SYNR3 Polyribonucleotide nucleotidyltransferase; TrEMBL-Plants: tr\|A2Q356\|A2Q356_MEDTR DUF594 family protein; Found in the gene: LotjaGi6g1v0199400	Domains CYTOPLASMIC_DOMAIN Coil IPR007658 IPR025315 NON_CYTOPLASMIC_DOMAIN PF04578 PF13968 PTHR31325 PTHR31325:SF186 TMhelix TRANSMEMBRANE	11
LotjaGi6g1v0199400.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DUF594 family protein; TAIR: AT5G45470.1 transmembrane protein, putative (DUF594); Swiss-Prot: sp\|A5GRD7\|PNP_SYNR3 Polyribonucleotide nucleotidyltransferase; TrEMBL-Plants: tr\|A2Q356\|A2Q356_MEDTR DUF594 family protein; Found in the gene: LotjaGi6g1v0199400	Domains CYTOPLASMIC_DOMAIN Coil IPR007658 IPR025315 NON_CYTOPLASMIC_DOMAIN PF04578 PF13968 PTHR31325 PTHR31325:SF186 TMhelix TRANSMEMBRANE	11

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
TRANSMEMBRANE	Phobius	1	14.29