Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

PF17232

Source: Pfam

Description

Elicitor peptide 1-7

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0045087 View details of GO:0045087 AmiGO InterPro QuickGO	Biological process	Innate immune response	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens.	Subterm of GO:0006952 GO:0006955

Associated Lotus transcripts 3

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi2g1v0096500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Target of trans acting-siR480/255 protein; TAIR: AT5G64880.1 transmembrane protein; Swiss-Prot: sp\|Q58144\|RUBY_METJA Putative rubrerythrin; TrEMBL-Plants: tr\|A0A1J7HI47\|A0A1J7HI47_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0096500_LC	Domains IPR035176 PF17232 PTHR35771 PTHR35771:SF2 mobidb-lite	5
LotjaGi5g1v0283200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Late embryogenesis abundant protein (LEA) family protein; TAIR: AT4G13230.1 Late embryogenesis abundant protein (LEA) family protein; Swiss-Prot: sp\|C4K4A3\|PYRD_HAMD5 Dihydroorotate dehydrogenase (quinone); TrEMBL-Plants: tr\|C6SX82\|C6SX82_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0283200	Domains IPR035176 PF17232 PTHR35771 PTHR35771:SF2 mobidb-lite	5
LotjaGi5g1v0283200.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Late embryogenesis abundant protein (LEA) family protein; TAIR: AT4G13230.1 Late embryogenesis abundant protein (LEA) family protein; Swiss-Prot: sp\|C4K4A3\|PYRD_HAMD5 Dihydroorotate dehydrogenase (quinone); TrEMBL-Plants: tr\|C6SX82\|C6SX82_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0283200	Domains IPR035176 PF17232 PTHR35771 PTHR35771:SF2 mobidb-lite	5

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	33.33