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Nucleoside diphosphate kinase signature
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Nucleoside diphosphate kinase activity | Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate. | ||
Biological process | Nucleoside diphosphate phosphorylation | The process of introducing a phosphate group into a nucleoside diphosphate to produce a nucleoside triphosphate. | ||
Biological process | GTP biosynthetic process | The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate. | ||
Biological process | UTP biosynthetic process | The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate. | ||
Biological process | CTP biosynthetic process | The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate. |
Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | RecName: Full=Nucleoside diphosphate kinase 4, chloroplastic; AltName: Full=Nucleoside diphosphate kinase III; AltName: Full=Nucleoside diphosphate kinase IV; Short=NDK IV; Short=NDP kinase IV; Short=NDPK IV; Flags: Precursorgi|19699051|gb|AAL91136.1| nucleoside diphosphate kinase III [Spinacia oleracea] gi|45477151|sp|Q8RXA8.1|NDK4_SPIOL | 10 | ||
– | RecName: Full=Nucleoside diphosphate kinase 4, chloroplastic; AltName: Full=Nucleoside diphosphate kinase III; AltName: Full=Nucleoside diphosphate kinase IV; Short=NDK IV; Short=NDP kinase IV; Short=NDPK IV; Flags: Precursorgi|19699051|gb|AAL91136.1| nucleoside diphosphate kinase III [Spinacia oleracea] gi|45477151|sp|Q8RXA8.1|NDK4_SPIOL | 10 | ||
– | Nucleoside diphosphate kinase IV [Arabidopsis thaliana] gi|18416233|ref|NP_567690.1| | 11 | ||
– | PREDICTED: nucleoside diphosphate kinase 6-like isoform X3 [Cicer arietinum] gi|502156524|ref|XP_004510517.1| | 17 | ||
– | PREDICTED: nucleoside diphosphate kinase 6-like isoform X5 [Cicer arietinum] gi|502156528|ref|XP_004510519.1| | 16 | ||
– | PREDICTED: nucleoside diphosphate kinase 2, chloroplastic [Glycine max] gi|356513927|ref|XP_003525659.1| | 19 | ||
– | RecName: Full=Nucleoside diphosphate kinase 4, chloroplastic; AltName: Full=Nucleoside diphosphate kinase III; AltName: Full=Nucleoside diphosphate kinase IV; Short=NDK IV; Short=NDP kinase IV; Short=NDPK IV; Flags: Precursorgi|19699051|gb|AAL91136.1| nucleoside diphosphate kinase III [Spinacia oleracea] gi|45477151|sp|Q8RXA8.1|NDK4_SPIOL | 18 | ||
– | Nucleoside diphosphate kinase; TAIR: AT4G23900.1 Nucleoside diphosphate kinase family protein; Swiss-Prot: sp|Q8LAH8|NDK4_ARATH Nucleoside diphosphate kinase IV, chloroplastic/mitochondrial; TrEMBL-Plants: tr|V4TLN6|V4TLN6_9ROSI Nucleoside diphosphate kinase; Found in the gene: LotjaGi2g1v0441200 | 14 | ||
– | Nucleoside diphosphate kinase; TAIR: AT4G09320.1 nucleoside diphosphate kinase; Swiss-Prot: sp|Q39839|NDK1_SOYBN Nucleoside diphosphate kinase 1; TrEMBL-Plants: tr|I3S3D3|I3S3D3_LOTJA Nucleoside diphosphate kinase; Found in the gene: LotjaGi3g1v0068500 | 14 | ||
– | Nucleoside diphosphate kinase; TAIR: AT1G17410.1 Nucleoside diphosphate kinase family protein; Swiss-Prot: sp|Q6NLG3|NDK5_ARATH Probable nucleoside diphosphate kinase 5; TrEMBL-Plants: tr|I3SBN5|I3SBN5_LOTJA Nucleoside diphosphate kinase; Found in the gene: LotjaGi3g1v0412500 | 19 | ||
– | Nucleoside diphosphate kinase; TAIR: AT1G17410.1 Nucleoside diphosphate kinase family protein; Swiss-Prot: sp|Q6NLG3|NDK5_ARATH Probable nucleoside diphosphate kinase 5; TrEMBL-Plants: tr|I3SBN5|I3SBN5_LOTJA Nucleoside diphosphate kinase; Found in the gene: LotjaGi3g1v0412500 | 19 | ||
– | Nucleoside diphosphate kinase; TAIR: AT5G63310.1 nucleoside diphosphate kinase 2; Swiss-Prot: sp|P47923|NDK2_PEA Nucleoside diphosphate kinase 2, chloroplastic; TrEMBL-Plants: tr|I3SNP5|I3SNP5_LOTJA Nucleoside diphosphate kinase; Found in the gene: LotjaGi4g1v0224100 | 21 | ||
– | Nucleoside diphosphate kinase; TAIR: AT4G23895.3 Pleckstrin homology (PH) domain-containing protein; Swiss-Prot: sp|Q8RXA8|NDK4_SPIOL Nucleoside diphosphate kinase 4, chloroplastic; TrEMBL-Plants: tr|I3SS10|I3SS10_LOTJA Nucleoside diphosphate kinase; Found in the gene: LotjaGi4g1v0435100 | 20 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
cd04413 | CDD | 1 | 7.69 |