Domain Predictions — View

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PTHR12835

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0004077 View details of GO:0004077 AmiGO InterPro QuickGO	Molecular function	Biotin-[acetyl-CoA-carboxylase] ligase activity	Catalysis of the reaction: ATP + biotin + apo-(acetyl-CoA:carbon-dioxide ligase (ADP forming)) = AMP + diphosphate + (acetyl-CoA:carbon-dioxide ligase (ADP forming)).	Subterm of GO:0018271
GO:0006464 View details of GO:0006464 AmiGO InterPro QuickGO	Biological process	Cellular protein modification process	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) occurring at the level of an individual cell. Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).	Subterm of GO:0036211 GO:0044267

Associated Lotus transcripts 4

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0086109.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: biotin--protein ligase-like [Cicer arietinum] gi\|502130276\|ref\|XP_004500594.1\|	Domains G3DSA:3.30.930.10 IPR004143 IPR004408 PF03099 PS51733 PTHR12835 SSF55681	7
Lj0g3v0203999.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Holocarboxylase synthetase hcs2 [Medicago truncatula] gi\|357461633\|ref\|XP_003601098.1\|	Domains G3DSA:3.30.930.10 IPR004408 PTHR12835 SSF55681	4
Lj0g3v0203999.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Holocarboxylase synthetase hcs2 [Medicago truncatula] gi\|357461633\|ref\|XP_003601098.1\|	Domains G3DSA:3.30.930.10 IPR004143 IPR004408 NON_CYTOPLASMIC_DOMAIN PF03099 PS51733 PTHR12835 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF55681	12
LotjaGi1g1v0254100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Biotin holocarboxylase synthetase 1-like protein; TAIR: AT2G25710.1 holocarboxylase synthase 1; Swiss-Prot: sp\|Q9SL92\|HCS1_ARATH Biotin--protein ligase 1, chloroplastic; TrEMBL-Plants: tr\|G7J3L5\|G7J3L5_MEDTR Biotin holocarboxylase synthetase, putative; Found in the gene: LotjaGi1g1v0254100	Domains G3DSA:3.30.930.10 IPR003142 IPR004143 IPR004408 PF02237 PF03099 PS51733 PTHR12835 PTHR12835:SF5 SSF55681 TIGR00121 cd16442	12

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd16442	CDD	1	25.00