Domain Predictions — View

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PTHR31265:SF1

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 5

Transcript	Name	Description	Predicted domains	Domain count
Lj6g3v1934060.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Glutamate-gated kainate-type ion channel receptor subunit GluR5 [Medicago truncatula] gi\|357447333\|ref\|XP_003593942.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:2.60.120.260 IPR006946 IPR008979 NON_CYTOPLASMIC_DOMAIN PF04862 PTHR31265 PTHR31265:SF1 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF49785 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK TMhelix TRANSMEMBRANE	17
LotjaGi6g1v0308600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642); TAIR: AT1G29980.1 choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642); Swiss-Prot: sp\|O94342\|YHM9_SCHPO Probable metabolite transport protein C1271.09; TrEMBL-Plants: tr\|I3T893\|I3T893_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0308600	Domains CYTOPLASMIC_DOMAIN G3DSA:2.60.120.260 IPR006946 IPR008979 NON_CYTOPLASMIC_DOMAIN PF04862 PTHR31265 PTHR31265:SF1 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF49785 SignalP-TM SignalP-noTM TMhelix TRANSMEMBRANE	17
LotjaGi6g1v0308600.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642); TAIR: AT1G29980.2 choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642); Swiss-Prot: sp\|O94342\|YHM9_SCHPO Probable metabolite transport protein C1271.09; TrEMBL-Plants: tr\|I3T893\|I3T893_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0308600	Domains IPR006946 IPR008979 PF04862 PTHR31265 PTHR31265:SF1 SSF49785 SignalP-TM	7
LotjaGi6g1v0308600.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642); TAIR: AT1G29980.2 choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642); Swiss-Prot: sp\|O94342\|YHM9_SCHPO Probable metabolite transport protein C1271.09; TrEMBL-Plants: tr\|I3T893\|I3T893_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0308600	Domains CYTOPLASMIC_DOMAIN G3DSA:2.60.120.260 IPR006946 IPR008979 NON_CYTOPLASMIC_DOMAIN PF04862 PTHR31265 PTHR31265:SF1 SSF49785 SignalP-TM TRANSMEMBRANE	11
LotjaGi6g1v0308600.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642); TAIR: AT1G29980.2 choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642); Swiss-Prot: sp\|O94342\|YHM9_SCHPO Probable metabolite transport protein C1271.09; TrEMBL-Plants: tr\|I3T893\|I3T893_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0308600	Domains CYTOPLASMIC_DOMAIN G3DSA:2.60.120.260 IPR006946 IPR008979 NON_CYTOPLASMIC_DOMAIN PF04862 PTHR31265 PTHR31265:SF1 SSF49785 TRANSMEMBRANE	10

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
TRANSMEMBRANE	Phobius	1	20.00