Domain Predictions — View

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PTHR34368:SF2

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 7

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0065339.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Alkaline phytoceramidase (aPHC) [Arabidopsis thaliana] gi\|334187627\|ref\|NP_001190292.1\|	Domains NON_CYTOPLASMIC_DOMAIN PTHR34368 PTHR34368:SF2 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION TMhelix	9
Lj0g3v0065349.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Alkaline phytoceramidase (aPHC) [Arabidopsis thaliana] gi\|334187627\|ref\|NP_001190292.1\|	Domains NON_CYTOPLASMIC_DOMAIN PTHR34368 PTHR34368:SF2 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION TMhelix	9
Lj1g3v1786020.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Alkaline phytoceramidase (aPHC) [Arabidopsis thaliana] gi\|334187627\|ref\|NP_001190292.1\|	Domains CYTOPLASMIC_DOMAIN IPR008901 NON_CYTOPLASMIC_DOMAIN PF05875 PTHR34368 PTHR34368:SF2 TMhelix TRANSMEMBRANE	8
Lj5g3v0404980.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Alkaline phytoceramidase (aPHC) [Theobroma cacao] gi\|508782650\|gb\|EOY29906.1\|	Domains CYTOPLASMIC_DOMAIN IPR008901 NON_CYTOPLASMIC_DOMAIN PF05875 PTHR34368 PTHR34368:SF2 TMhelix TRANSMEMBRANE	8
Lj5g3v0404980.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Alkaline phytoceramidase (aPHC) [Theobroma cacao] gi\|508782650\|gb\|EOY29906.1\|	Domains CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN PTHR34368 PTHR34368:SF2 TMhelix TRANSMEMBRANE	7
LotjaGi1g1v0366900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Alkaline phytoceramidase (APHC); TAIR: AT5G11870.2 Alkaline phytoceramidase (aPHC); Swiss-Prot: sp\|Q57321\|MGLC_TREPA Galactoside transport system permease protein MglC homolog; TrEMBL-Plants: tr\|V7AW36\|V7AW36_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0366900	Domains CYTOPLASMIC_DOMAIN IPR008901 NON_CYTOPLASMIC_DOMAIN PF05875 PTHR34368 PTHR34368:SF2 TMhelix TRANSMEMBRANE	8
LotjaGi5g1v0042600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Alkaline phytoceramidase (APHC); TAIR: AT5G11870.2 Alkaline phytoceramidase (aPHC); Swiss-Prot: sp\|P43531\|YNFM_ECOLI Inner membrane transport protein YnfM; TrEMBL-Plants: tr\|G7I9X5\|G7I9X5_MEDTR Alkaline phytoceramidase (APHC); Found in the gene: LotjaGi5g1v0042600_LC	Domains CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN PTHR34368 PTHR34368:SF2 TMhelix TRANSMEMBRANE	7

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
TRANSMEMBRANE	Phobius	1	14.29