Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

PTHR45651:SF55

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 15

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi1g1v0792000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cyclic nucleotide-gated channel; TAIR: AT5G53130.1 cyclic nucleotide gated channel 1; Swiss-Prot: sp\|O65717\|CNGC1_ARATH Cyclic nucleotide-gated ion channel 1; TrEMBL-Plants: tr\|G7L436\|G7L436_MEDTR Cyclic nucleotide-gated ion channel-like protein; Found in the gene: LotjaGi1g1v0792000	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:1.10.287.630 G3DSA:2.60.120.10 IPR000595 IPR005821 IPR014710 IPR018490 NON_CYTOPLASMIC_DOMAIN PF00520 PS50042 PTHR45651 PTHR45651:SF55 SM00100 SSF51206 SSF81324 TMhelix TRANSMEMBRANE cd00038 mobidb-lite	20
LotjaGi1g1v0792000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cyclic nucleotide-gated ion channel-like protein; TAIR: AT5G53130.1 cyclic nucleotide gated channel 1; Swiss-Prot: sp\|O65717\|CNGC1_ARATH Cyclic nucleotide-gated ion channel 1; TrEMBL-Plants: tr\|A0A072U5G5\|A0A072U5G5_MEDTR Cyclic nucleotide-gated ion channel-like protein; Found in the gene: LotjaGi1g1v0792000	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:1.10.287.630 G3DSA:2.60.120.10 IPR000595 IPR005821 IPR014710 IPR018490 NON_CYTOPLASMIC_DOMAIN PF00520 PS50042 PTHR45651 PTHR45651:SF55 SM00100 SSF51206 SSF81324 TMhelix TRANSMEMBRANE cd00038 mobidb-lite	20
LotjaGi2g1v0071900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cyclic nucleotide-gated ion channel-like protein; TAIR: AT5G53130.1 cyclic nucleotide gated channel 1; Swiss-Prot: sp\|O65717\|CNGC1_ARATH Cyclic nucleotide-gated ion channel 1; TrEMBL-Plants: tr\|I1JRZ5\|I1JRZ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0071900_LC	Domains CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN PTHR45651 PTHR45651:SF55 TMhelix TRANSMEMBRANE	7
LotjaGi2g1v0071900_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cyclic nucleotide-gated ion channel-like protein; TAIR: AT5G53130.1 cyclic nucleotide gated channel 1; Swiss-Prot: sp\|O65717\|CNGC1_ARATH Cyclic nucleotide-gated ion channel 1; TrEMBL-Plants: tr\|I1JRZ5\|I1JRZ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0071900_LC	Domains CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN PTHR45651 PTHR45651:SF55 TMhelix TRANSMEMBRANE	7
LotjaGi2g1v0071900_LC.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cyclic nucleotide-gated ion channel-like protein; TAIR: AT5G53130.1 cyclic nucleotide gated channel 1; Swiss-Prot: sp\|O65717\|CNGC1_ARATH Cyclic nucleotide-gated ion channel 1; TrEMBL-Plants: tr\|I1JRZ5\|I1JRZ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0071900_LC	Domains CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN PTHR45651 PTHR45651:SF55 TMhelix TRANSMEMBRANE	7
LotjaGi2g1v0071900_LC.6 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cyclic nucleotide-gated ion channel-like protein; TAIR: AT5G53130.1 cyclic nucleotide gated channel 1; Swiss-Prot: sp\|O65717\|CNGC1_ARATH Cyclic nucleotide-gated ion channel 1; TrEMBL-Plants: tr\|I1JRZ5\|I1JRZ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0071900_LC	Domains CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN PTHR45651 PTHR45651:SF55 TMhelix TRANSMEMBRANE	7
LotjaGi3g1v0049800_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cyclic nucleotide-gated ion channel-like protein; TAIR: AT5G53130.1 cyclic nucleotide gated channel 1; Swiss-Prot: sp\|O65717\|CNGC1_ARATH Cyclic nucleotide-gated ion channel 1; TrEMBL-Plants: tr\|I1JRZ5\|I1JRZ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0049800_LC	Domains CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN PTHR45651 PTHR45651:SF55 TMhelix TRANSMEMBRANE	7
LotjaGi3g1v0049800_LC.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cyclic nucleotide-gated ion channel-like protein; TAIR: AT5G53130.1 cyclic nucleotide gated channel 1; Swiss-Prot: sp\|O65717\|CNGC1_ARATH Cyclic nucleotide-gated ion channel 1; TrEMBL-Plants: tr\|I1JRZ5\|I1JRZ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0049800_LC	Domains CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN PTHR45651 PTHR45651:SF55 TMhelix TRANSMEMBRANE	7
LotjaGi3g1v0049800_LC.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cyclic nucleotide-gated ion channel-like protein; TAIR: AT5G53130.1 cyclic nucleotide gated channel 1; Swiss-Prot: sp\|O65717\|CNGC1_ARATH Cyclic nucleotide-gated ion channel 1; TrEMBL-Plants: tr\|I1JRZ5\|I1JRZ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0049800_LC	Domains CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN PTHR45651 PTHR45651:SF55 TMhelix TRANSMEMBRANE	7
LotjaGi3g1v0049800_LC.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cyclic nucleotide-gated ion channel-like protein; TAIR: AT5G53130.1 cyclic nucleotide gated channel 1; Swiss-Prot: sp\|O65717\|CNGC1_ARATH Cyclic nucleotide-gated ion channel 1; TrEMBL-Plants: tr\|I1JRZ5\|I1JRZ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0049800_LC	Domains CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN PTHR45651 PTHR45651:SF55 TMhelix TRANSMEMBRANE	7
LotjaGi3g1v0049800_LC.9 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cyclic nucleotide-gated ion channel-like protein; TAIR: AT5G53130.1 cyclic nucleotide gated channel 1; Swiss-Prot: sp\|O65717\|CNGC1_ARATH Cyclic nucleotide-gated ion channel 1; TrEMBL-Plants: tr\|I1NCK8\|I1NCK8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0049800_LC	Domains CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN PTHR45651 PTHR45651:SF55 TMhelix TRANSMEMBRANE	7
LotjaGi3g1v0538900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cyclic nucleotide-gated ion channel-like protein; TAIR: AT5G53130.1 cyclic nucleotide gated channel 1; Swiss-Prot: sp\|O65717\|CNGC1_ARATH Cyclic nucleotide-gated ion channel 1; TrEMBL-Plants: tr\|I1JRZ5\|I1JRZ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0538900_LC	Domains CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN PTHR45651 PTHR45651:SF55 TMhelix TRANSMEMBRANE	7
LotjaGi3g1v0538900_LC.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cyclic nucleotide-gated ion channel-like protein; TAIR: AT5G53130.1 cyclic nucleotide gated channel 1; Swiss-Prot: sp\|O65717\|CNGC1_ARATH Cyclic nucleotide-gated ion channel 1; TrEMBL-Plants: tr\|I1JRZ5\|I1JRZ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0538900_LC	Domains CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN PTHR45651 PTHR45651:SF55 TMhelix TRANSMEMBRANE	7
LotjaGi3g1v0538900_LC.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cyclic nucleotide-gated ion channel-like protein; TAIR: AT5G53130.1 cyclic nucleotide gated channel 1; Swiss-Prot: sp\|O65717\|CNGC1_ARATH Cyclic nucleotide-gated ion channel 1; TrEMBL-Plants: tr\|I1JRZ5\|I1JRZ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0538900_LC	Domains CYTOPLASMIC_DOMAIN G3DSA:2.40.330.10 IPR015300 NON_CYTOPLASMIC_DOMAIN PTHR45651 PTHR45651:SF55 SSF101936 TMhelix TRANSMEMBRANE	9
LotjaGi3g1v0538900_LC.7 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cyclic nucleotide-gated ion channel-like protein; TAIR: AT5G53130.1 cyclic nucleotide gated channel 1; Swiss-Prot: sp\|O65717\|CNGC1_ARATH Cyclic nucleotide-gated ion channel 1; TrEMBL-Plants: tr\|I1NCK8\|I1NCK8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0538900_LC	Domains CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN PTHR45651 PTHR45651:SF55 TMhelix TRANSMEMBRANE	7

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
TRANSMEMBRANE	Phobius	1	6.67