Domain Predictions — View

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TIGR00495

Source: TIGRFAM

Description

crvDNA_42K: DNA-binding protein, 42 kDa

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 7

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0302799.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	EBP1 [Ammopiptanthus mongolicus] gi\|99083509\|gb\|ABF66654.1\|	Domains G3DSA:1.10.10.10 G3DSA:3.90.230.10 IPR000994 IPR001714 IPR004545 IPR011991 PF00557 PR00599 PTHR10804 PTHR10804:SF11 SSF46785 SSF55920 TIGR00495 cd01089	14
Lj0g3v0302799.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	EBP1 [Ammopiptanthus mongolicus] gi\|99083509\|gb\|ABF66654.1\|	Domains G3DSA:1.10.10.10 G3DSA:3.90.230.10 IPR000994 IPR001714 IPR004545 IPR011991 PF00557 PR00599 PTHR10804 PTHR10804:SF11 SSF46785 SSF55920 TIGR00495 cd01089 mobidb-lite	15
Lj0g3v0302799.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	EBP1 [Ammopiptanthus mongolicus] gi\|99083509\|gb\|ABF66654.1\|	Domains G3DSA:1.10.10.10 G3DSA:3.90.230.10 IPR000994 IPR001714 IPR004545 IPR011991 PF00557 PR00599 PTHR10804 PTHR10804:SF11 SSF46785 SSF55920 TIGR00495 cd01089	14
LotjaGi3g1v0194700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Methionine aminopeptidase 2; TAIR: AT3G51800.3 metallopeptidase M24 family protein; Swiss-Prot: sp\|M1CZC0\|EBP1_SOLTU ERBB-3 BINDING PROTEIN 1; TrEMBL-Plants: tr\|A0EVX1\|A0EVX1_9FABA EBP1; Found in the gene: LotjaGi3g1v0194700	Domains G3DSA:1.10.10.10 G3DSA:3.90.230.10 IPR000994 IPR001714 IPR004545 IPR036005 IPR036388 IPR036390 PF00557 PR00599 PTHR10804 PTHR10804:SF134 SSF46785 SSF55920 TIGR00495 cd01089 mobidb-lite	17
LotjaGi3g1v0194700.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Methionine aminopeptidase 2; TAIR: AT3G51800.3 metallopeptidase M24 family protein; Swiss-Prot: sp\|M1CZC0\|EBP1_SOLTU ERBB-3 BINDING PROTEIN 1; TrEMBL-Plants: tr\|A0EVX1\|A0EVX1_9FABA EBP1; Found in the gene: LotjaGi3g1v0194700	Domains G3DSA:1.10.10.10 G3DSA:3.90.230.10 IPR000994 IPR001714 IPR004545 IPR036005 IPR036388 IPR036390 PF00557 PR00599 PTHR10804 PTHR10804:SF134 SSF46785 SSF55920 TIGR00495 cd01089 mobidb-lite	17
LotjaGi3g1v0194700.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Methionine aminopeptidase 2; TAIR: AT3G51800.3 metallopeptidase M24 family protein; Swiss-Prot: sp\|M1CZC0\|EBP1_SOLTU ERBB-3 BINDING PROTEIN 1; TrEMBL-Plants: tr\|A0EVX1\|A0EVX1_9FABA EBP1; Found in the gene: LotjaGi3g1v0194700	Domains G3DSA:1.10.10.10 G3DSA:3.90.230.10 IPR000994 IPR001714 IPR004545 IPR036005 IPR036388 IPR036390 PF00557 PR00599 PTHR10804 PTHR10804:SF134 SSF46785 SSF55920 TIGR00495 cd01089 mobidb-lite	17
LotjaGi3g1v0194800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Methionine aminopeptidase 2; TAIR: AT3G51800.3 metallopeptidase M24 family protein; Swiss-Prot: sp\|M1CZC0\|EBP1_SOLTU ERBB-3 BINDING PROTEIN 1; TrEMBL-Plants: tr\|A0EVX1\|A0EVX1_9FABA EBP1; Found in the gene: LotjaGi3g1v0194800	Domains G3DSA:1.10.10.10 G3DSA:3.90.230.10 IPR000994 IPR001714 IPR004545 IPR036005 IPR036388 IPR036390 PF00557 PR00599 PTHR10804 PTHR10804:SF134 SSF46785 SSF55920 TIGR00495 cd01089 mobidb-lite	17

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	14.29