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P_ylase: glycogen/starch/alpha-glucan phosphorylases
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Phosphorylase activity | Catalysis of the reaction: 1,4-alpha-D-glucosyl(n) + phosphate = 1,4-alpha-D-glucosyl(n-1) + alpha-D-glucose 1-phosphate. The name should be qualified in each instance by adding the name of the natural substrate, e.g. maltodextrin phosphorylase, starch phosphorylase, glycogen phosphorylase. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. | ||
| Molecular function | Pyridoxal phosphate binding | Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic-like [Glycine max] gi|356577161|ref|XP_003556696.1| | 11 | ||
| – | PREDICTED: alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic-like [Glycine max] gi|356551144|ref|XP_003543938.1| | 13 | ||
| – | PREDICTED: glycogen phosphorylase 1-like [Cicer arietinum] gi|502078074|ref|XP_004485832.1| | 14 | ||
| – | PREDICTED: glycogen phosphorylase 1-like [Cicer arietinum] gi|502078074|ref|XP_004485832.1| | 15 | ||
| – | Alpha-1,4 glucan phosphorylase; TAIR: AT3G29320.1 Glycosyl transferase, family 35; Swiss-Prot: sp|P53536|PHSL_VICFA Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic; TrEMBL-Plants: tr|A0A151T017|A0A151T017_CAJCA Alpha-1,4 glucan phosphorylase; Found in the gene: LotjaGi2g1v0265100 | 14 | ||
| – | Alpha-1,4 glucan phosphorylase; TAIR: AT3G29320.1 Glycosyl transferase, family 35; Swiss-Prot: sp|P53536|PHSL_VICFA Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic; TrEMBL-Plants: tr|A0A151T017|A0A151T017_CAJCA Alpha-1,4 glucan phosphorylase; Found in the gene: LotjaGi2g1v0265100 | 14 | ||
| – | Alpha-1,4 glucan phosphorylase; TAIR: AT3G29320.1 Glycosyl transferase, family 35; Swiss-Prot: sp|P53536|PHSL_VICFA Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic; TrEMBL-Plants: tr|A0A151T017|A0A151T017_CAJCA Alpha-1,4 glucan phosphorylase; Found in the gene: LotjaGi2g1v0265100 | 14 | ||
| – | Alpha-1,4 glucan phosphorylase; TAIR: AT3G29320.1 Glycosyl transferase, family 35; Swiss-Prot: sp|P53536|PHSL_VICFA Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic; TrEMBL-Plants: tr|A0A151T017|A0A151T017_CAJCA Alpha-1,4 glucan phosphorylase; Found in the gene: LotjaGi2g1v0265100 | 14 | ||
| – | Alpha-1,4 glucan phosphorylase; TAIR: AT3G29320.1 Glycosyl transferase, family 35; Swiss-Prot: sp|P53536|PHSL_VICFA Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic; TrEMBL-Plants: tr|A0A151T017|A0A151T017_CAJCA Alpha-1,4 glucan phosphorylase; Found in the gene: LotjaGi2g1v0265100 | 14 | ||
| – | Alpha-1,4 glucan phosphorylase; TAIR: AT3G29320.1 Glycosyl transferase, family 35; Swiss-Prot: sp|P53535|PHSL2_SOLTU Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic; TrEMBL-Plants: tr|K7N100|K7N100_SOYBN Alpha-1,4 glucan phosphorylase; Found in the gene: LotjaGi4g1v0088400 | 13 | ||
| – | Alpha-1,4 glucan phosphorylase; TAIR: AT3G29320.1 Glycosyl transferase, family 35; Swiss-Prot: sp|P53535|PHSL2_SOLTU Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic; TrEMBL-Plants: tr|K7N100|K7N100_SOYBN Alpha-1,4 glucan phosphorylase; Found in the gene: LotjaGi4g1v0088400 | 13 | ||
| – | Alpha-1,4 glucan phosphorylase; TAIR: AT3G29320.1 Glycosyl transferase, family 35; Swiss-Prot: sp|P53535|PHSL2_SOLTU Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic; TrEMBL-Plants: tr|K7N100|K7N100_SOYBN Alpha-1,4 glucan phosphorylase; Found in the gene: LotjaGi4g1v0088400 | 13 | ||
| – | Alpha-1,4 glucan phosphorylase; TAIR: AT3G46970.1 alpha-glucan phosphorylase 2; Swiss-Prot: sp|P53537|PHSH_VICFA Alpha-glucan phosphorylase, H isozyme; TrEMBL-Plants: tr|A0A0B2PFG1|A0A0B2PFG1_GLYSO Alpha-1,4 glucan phosphorylase; Found in the gene: LotjaGi6g1v0134000 | 13 | ||
| – | Alpha-1,4 glucan phosphorylase; TAIR: AT3G46970.1 alpha-glucan phosphorylase 2; Swiss-Prot: sp|P53537|PHSH_VICFA Alpha-glucan phosphorylase, H isozyme; TrEMBL-Plants: tr|A0A0B2PFG1|A0A0B2PFG1_GLYSO Alpha-1,4 glucan phosphorylase; Found in the gene: LotjaGi6g1v0134000 | 13 | ||
| – | Alpha-1,4 glucan phosphorylase; TAIR: AT3G46970.1 alpha-glucan phosphorylase 2; Swiss-Prot: sp|Q00766|PHS1_DICDI Glycogen phosphorylase 1; TrEMBL-Plants: tr|V7BU77|V7BU77_PHAVU Alpha-1,4 glucan phosphorylase; Found in the gene: LotjaGi6g1v0328500 | 14 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| cd04300 | CDD | 1 | 6.67 |