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TIGR02731

Source: TIGRFAM

Description

phytoene_desat: phytoene desaturase

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016117
Biological process Carotenoid biosynthetic process The chemical reactions and pathways resulting in the formation of carotenoids, tetraterpenoid compounds in which two units of 4 isoprenoid residues joined head-to-tail are themselves joined tail-to-tail.
Subterm of
GO:0016166
Molecular function Phytoene dehydrogenase activity Catalysis of the dehydrogenation of phytoene to produce a carotenoid intermediate such as phytofluene.
Subterm of

Associated Lotus transcripts 3

Transcript Name Description Predicted domains Domain count
Lj0g3v0087419.1
– PREDICTED: phytoene dehydrogenase, chloroplastic/chromoplastic-like [Cicer arietinum] gi|502135246|ref|XP_004502268.1|
Domains
9
LotjaGi6g1v0103000.1
– Phytoene desaturase; TAIR: AT4G14210.1 phytoene desaturase 3; Swiss-Prot: sp|P28553|CRTI_SOYBN Phytoene dehydrogenase, chloroplastic/chromoplastic; TrEMBL-Plants: tr|I1MYC3|I1MYC3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0103000
Domains
9
LotjaGi6g1v0103000.2
– Phytoene desaturase; TAIR: AT4G14210.1 phytoene desaturase 3; Swiss-Prot: sp|P28553|CRTI_SOYBN Phytoene dehydrogenase, chloroplastic/chromoplastic; TrEMBL-Plants: tr|I1MYC3|I1MYC3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0103000
Domains
9

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
TIGR02731 TIGRFAM 1 33.33