Domain Predictions — View

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cd05475

Source: CDD

Description

nucellin_like

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0004190 View details of GO:0004190 AmiGO InterPro QuickGO	Molecular function	Aspartic-type endopeptidase activity	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile.	Subterm of GO:0004175 GO:0070001

Associated Lotus transcripts 4

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0362459.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: aspartic proteinase Asp1-like [Glycine max] gi\|356554625\|ref\|XP_003545645.1\|	Domains G3DSA:2.40.70.10 IPR001461 IPR021109 IPR032799 IPR032861 IPR033121 IPR033823 NON_CYTOPLASMIC_DOMAIN PF14541 PF14543 PS51767 PTHR13683 PTHR13683:SF316 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF50630 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK cd05475	21
Lj0g3v0362459.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: aspartic proteinase Asp1-like [Glycine max] gi\|356554625\|ref\|XP_003545645.1\|	Domains G3DSA:2.40.70.10 IPR001461 IPR021109 IPR032799 IPR032861 IPR033121 IPR033823 NON_CYTOPLASMIC_DOMAIN PF14541 PF14543 PS51767 PTHR13683 PTHR13683:SF316 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF50630 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK cd05475	21
LotjaGi1g1v0158000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Eukaryotic aspartyl protease family protein; TAIR: AT1G77480.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp\|Q0IU52\|ASP1_ORYSJ Aspartic proteinase Asp1; TrEMBL-Plants: tr\|A0A0B2QFW9\|A0A0B2QFW9_GLYSO Aspartic proteinase Asp1; Found in the gene: LotjaGi1g1v0158000	Domains G3DSA:2.40.70.10 IPR001461 IPR021109 IPR032799 IPR032861 IPR033121 IPR033823 NON_CYTOPLASMIC_DOMAIN PF14541 PF14543 PR00792 PS51767 PTHR13683 PTHR13683:SF563 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF50630 SignalP-TM TMhelix cd05475	22
LotjaGi1g1v0158000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Eukaryotic aspartyl protease family protein; TAIR: AT1G44130.1 Eukaryotic aspartyl protease family protein; Swiss-Prot: sp\|Q0IU52\|ASP1_ORYSJ Aspartic proteinase Asp1; TrEMBL-Plants: tr\|A0A0B2QFW9\|A0A0B2QFW9_GLYSO Aspartic proteinase Asp1; Found in the gene: LotjaGi1g1v0158000	Domains G3DSA:2.40.70.10 IPR001461 IPR021109 IPR032799 IPR032861 IPR033121 IPR033823 NON_CYTOPLASMIC_DOMAIN PF14541 PF14543 PR00792 PS51767 PTHR13683 PTHR13683:SF563 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF50630 SignalP-TM TMhelix cd05475	22

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd05475	CDD	1	25.00