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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0362459 |
| Transcript ID | Lj0g3v0362459.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: aspartic proteinase Asp1-like [Glycine max] gi|356554625|ref|XP_003545645.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 6 | 6 | – | – | |
| SignalP | 1 | 31 | 31 | – | – | |
| SignalP | 1 | 39 | 39 | – | – | |
| Phobius | 1 | 31 | 31 | – | – | |
| Phobius | 7 | 26 | 20 | – | – | |
| PANTHER | 10 | 426 | 417 | 5.60E-228 | ||
| PANTHER | 10 | 426 | 417 | 5.60E-228 | – | |
| Phobius | 27 | 31 | 5 | – | – | |
| Phobius | 32 | 431 | 400 | – | – | |
| Gene3D | 54 | 239 | 186 | 5.00E-35 | ||
| SUPERFAMILY | 59 | 421 | 363 | 8.02E-80 | ||
| CDD | 65 | 418 | 354 | 9.57E-152 | ||
| Pfam | 67 | 239 | 173 | 5.20E-43 | ||
| ProSiteProfiles | 67 | 414 | 348 | 34.779 | ||
| Gene3D | 245 | 420 | 176 | 4.60E-22 | ||
| Pfam | 279 | 413 | 135 | 5.60E-18 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Aspartic-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile. | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of Lj0g3v0362459.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0362459.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.