Domain Predictions — View

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cd06160

Source: CDD

Description

S2P-M50_like_2

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 5

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v3979280.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Peptidase M50 family protein isoform 1 [Theobroma cacao] gi\|508718604\|gb\|EOY10501.1\|	Domains CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN PTHR31412 PTHR31412:SF0 TMhelix TRANSMEMBRANE cd06160 mobidb-lite	9
LotjaGi1g1v0078600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ethylene-dependent gravitropism-deficient and yellow-green-like 2 isoform 2; TAIR: AT5G05740.2 ethylene-dependent gravitropism-deficient and yellow-green-like 2; Swiss-Prot: sp\|B8AD72\|EGY2_ORYSI Probable zinc metalloprotease EGY2, chloroplastic; TrEMBL-Plants: tr\|V7B878\|V7B878_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0078600	Domains CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN PTHR31412 PTHR31412:SF5 TMhelix TRANSMEMBRANE cd06160 mobidb-lite	9
LotjaGi1g1v0078600.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ethylene-dependent gravitropism-deficient and yellow-green-like 2 isoform 2; TAIR: AT5G05740.3 ethylene-dependent gravitropism-deficient and yellow-green-like 2; Swiss-Prot: sp\|Q9FFK3\|EGY2_ARATH Probable zinc metalloprotease EGY2, chloroplastic; TrEMBL-Plants: tr\|V7B878\|V7B878_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0078600	Domains CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN PTHR31412 PTHR31412:SF5 TMhelix TRANSMEMBRANE cd06160 mobidb-lite	9
LotjaGi1g1v0647400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	M50 family peptidase; TAIR: AT5G35220.1 Peptidase M50 family protein; Swiss-Prot: sp\|Q949Y5\|EGY1_ARATH Probable zinc metalloprotease EGY1, chloroplastic; TrEMBL-Plants: tr\|A0A0L9U7J7\|A0A0L9U7J7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0647400	Domains CYTOPLASMIC_DOMAIN IPR008915 NON_CYTOPLASMIC_DOMAIN PF02163 PTHR31412 PTHR31412:SF0 TMhelix TRANSMEMBRANE cd06160 mobidb-lite	10
LotjaGi1g1v0647500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	M50 family peptidase; TAIR: AT5G35220.1 Peptidase M50 family protein; Swiss-Prot: sp\|Q949Y5\|EGY1_ARATH Probable zinc metalloprotease EGY1, chloroplastic; TrEMBL-Plants: tr\|A0A151TA22\|A0A151TA22_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0647500	Domains CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN PTHR31412 PTHR31412:SF0 TMhelix TRANSMEMBRANE cd06160 mobidb-lite	9

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	20.00