Domain Predictions — View

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cd10455

Source: CDD

Description

GIY-YIG_SLX1

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 2

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0072759.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: structure-specific endonuclease subunit SLX1-like [Glycine max] gi\|356537639\|ref\|XP_003537333.1\|	Domains Coil IPR000305 IPR027520 MF_03100 PF01541 PS50164 PTHR20208 PTHR20208:SF10 SSF82771 cd10455 mobidb-lite	11
LotjaGi6g1v0104600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Structure-specific endonuclease subunit SLX1 homolog; TAIR: AT2G30350.2 Excinuclease ABC, C subunit, N-terminal; Swiss-Prot: sp\|Q8BX32\|SLX1_MOUSE Structure-specific endonuclease subunit SLX1; TrEMBL-Plants: tr\|I1LLV5\|I1LLV5_SOYBN Structure-specific endonuclease subunit SLX1 homolog; Found in the gene: LotjaGi6g1v0104600	Domains Coil G3DSA:3.40.1440.10 IPR000305 IPR027520 IPR035901 MF_03100 PF01541 PS50164 PTHR20208 PTHR20208:SF10 SM00465 SSF82771 cd10455 mobidb-lite	14

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	50.00