Domain Predictions — View

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cd12382

Source: CDD

Description

RRM_RBMX_like

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 3

Transcript	Name	Description	Predicted domains	Domain count
Lj2g3v1647870.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Scaffold attachment factor B1 [Medicago truncatula] gi\|357483947\|ref\|XP_003612260.1\|	Domains G3DSA:3.30.70.330 IPR000504 IPR012677 PF00076 PS50102 PTHR15241 SM00360 SSF54928 cd12382 mobidb-lite	10
Lj2g3v1647870.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Scaffold attachment factor B1 [Medicago truncatula] gi\|357483947\|ref\|XP_003612260.1\|	Domains G3DSA:3.30.70.330 IPR000504 IPR012677 PF00076 PS50102 PTHR15241 SM00360 SSF54928 cd12382 mobidb-lite	10
LotjaGi6g1v0134100.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RNA-binding family protein; TAIR: AT1G07350.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp\|Q84TH4\|SR45A_ARATH Serine/arginine-rich splicing factor SR45a; TrEMBL-Plants: tr\|I3SKU2\|I3SKU2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0134100	Domains G3DSA:3.30.70.330 IPR000504 IPR012677 IPR035979 PF00076 PS50102 PTHR15241 PTHR15241:SF212 SM00360 SSF54928 cd12382 mobidb-lite	12

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	33.33