Domain Predictions — View

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cd16574

Source: CDD

Description

RING-HC_Topors

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 2

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi1g1v0746800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RING/U-box superfamily protein; TAIR: AT3G05670.1 RING/U-box protein; Swiss-Prot: sp\|Q9P1Y6\|PHRF1_HUMAN PHD and RING finger domain-containing protein 1; TrEMBL-Plants: tr\|A0A1J7GZV4\|A0A1J7GZV4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0746800	Domains Coil G3DSA:3.30.40.10 IPR001841 IPR001965 IPR011011 IPR013083 IPR017907 IPR019787 PF00628 PF13639 PS00518 PS50016 PS50089 PTHR47177 PTHR47177:SF3 SM00184 SM00249 SSF57850 SSF57903 cd16574 mobidb-lite	21
LotjaGi5g1v0228100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ring PHD family protein; TAIR: AT3G05670.1 RING/U-box protein; Swiss-Prot: sp\|Q9P1Y6\|PHRF1_HUMAN PHD and RING finger domain-containing protein 1; TrEMBL-Plants: tr\|A0A1J7GZV4\|A0A1J7GZV4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0228100_LC	Domains Coil G3DSA:3.30.40.10 IPR001841 IPR001965 IPR011011 IPR013083 IPR017907 IPR019787 PF00628 PF13639 PS00518 PS50016 PS50089 PTHR47177 PTHR47177:SF3 SM00184 SM00249 SSF57850 SSF57903 cd16574 mobidb-lite	21

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	50.00