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PF00628

Description

PHD-finger

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 149

Transcript Name Description Predicted domains Domain count
PHD and RING finger domain-containing protein [Medicago truncatula] gi|357511785|ref|XP_003626181.1| 19
PREDICTED: histone-lysine N-methyltransferase ATX4-like [Glycine max] gi|356518627|ref|XP_003527980.1| 31
PREDICTED: BAH and coiled-coil domain-containing protein 1-like [Glycine max] gi|356543233|ref|XP_003540067.1| 18
PREDICTED: BAH and coiled-coil domain-containing protein 1-like [Glycine max] gi|356516937|ref|XP_003527148.1| 17
Chromodomain helicase-DNA-binding protein [Medicago truncatula] gi|357490843|ref|XP_003615709.1| 11
PHD finger transcription factor-like [Oryza sativa Japonica Group] gi|34394455|dbj|BAC83629.1| 15
DNA binding protein [Arabidopsis lyrata subsp]. lyrata] gi|297843332|ref|XP_002889547.1| 21
PREDICTED: LOW QUALITY PROTEIN: histone acetyltransferase HAC1-like [Cicer arietinum] gi|502089455|ref|XP_004488916.1| 28
Chromatin remodeling 4 protein [Arabidopsis thaliana] gi|334188199|ref|NP_199293.3| 12
PREDICTED: PHD finger protein ALFIN-LIKE 1-like [Cicer arietinum] gi|502147358|ref|XP_004506752.1| 20
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein [Arabidopsis thaliana] gi|334186543|ref|NP_193228.6| 19
RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gi|42563280|ref|NP_177849.2| 14
PREDICTED: histone-lysine N-methyltransferase ATXR5-like [Cicer arietinum] gi|502136971|ref|XP_004502916.1| 11
PHD4 [Glycine max] gi|351725633|ref|NP_001237867.1| 20
PREDICTED: PHD finger protein ALFIN-LIKE 1-like [Cicer arietinum] gi|502147358|ref|XP_004506752.1| 20
PREDICTED: BAH and coiled-coil domain-containing protein 1-like [Glycine max] gi|356516937|ref|XP_003527148.1| 18
PREDICTED: LOW QUALITY PROTEIN: histone-lysine N-methyltransferase ATXR6-like [Cicer arietinum] gi|502124379|ref|XP_004498502.1| 13
Inhibitor of growth protein [Medicago truncatula] gi|357508653|ref|XP_003624615.1| 16
Chromodomain-helicase-DNA-binding protein [Medicago truncatula] gi|357510879|ref|XP_003625728.1| 20
PREDICTED: bromodomain adjacent to zinc finger domain protein 1A-like isoform X1 [Cicer arietinum] gi|502113145|ref|XP_004494555.1| 21
PREDICTED: methyl-CpG-binding domain-containing protein 9-like [Cicer arietinum] gi|502090713|ref|XP_004489317.1| 32
Lysine-specific demethylase 5D [Medicago truncatula] gi|357481615|ref|XP_003611093.1| 13
Lysine-specific demethylase 5D [Medicago truncatula] gi|357481617|ref|XP_003611094.1| 35
Chromodomain helicase-DNA-binding protein [Medicago truncatula] gi|357490843|ref|XP_003615709.1| 20
PHD finger protein [Medicago truncatula] gi|357494725|ref|XP_003617651.1| 18
PREDICTED: PHD finger protein ALFIN-LIKE 4-like [Cicer arietinum] gi|502081422|ref|XP_004486862.1| 17
PREDICTED: BAH and coiled-coil domain-containing protein 1-like [Glycine max] gi|356543233|ref|XP_003540067.1| 17
PREDICTED: protein strawberry notch homolog 1-like [Cicer arietinum] gi|502087519|ref|XP_004488559.1| 21
PREDICTED: protein strawberry notch homolog 1-like [Cicer arietinum] gi|502087519|ref|XP_004488559.1| 22
Histone H3 acetyltransferase IDM1 [Arabidopsis thaliana] gi|15232453|ref|NP_188116.1| 20
Chromodomain-helicase-DNA-binding protein [Medicago truncatula] gi|357472039|ref|XP_003606304.1| 22
PREDICTED: origin recognition complex subunit 1-like [Glycine max] gi|356557695|ref|XP_003547149.1| 26
PREDICTED: histone-lysine N-methyltransferase ATX3-like [Glycine max] gi|356522510|ref|XP_003529889.1| 30
PREDICTED: histone-lysine N-methyltransferase ATX3-like [Glycine max] gi|356522510|ref|XP_003529889.1| 30
PHD1 [Glycine max] gi|351727220|ref|NP_001237921.1| 21
Chromodomain-helicase-DNA-binding protein [Medicago truncatula] gi|357472039|ref|XP_003606304.1| 22
Chromodomain helicase DNA binding protein [Medicago truncatula] gi|357474041|ref|XP_003607305.1| 21
13
PREDICTED: PHD finger protein At1g33420-like [Glycine max] gi|356531716|ref|XP_003534422.1| 15
PHD5 [Glycine max] gi|351726166|ref|NP_001237885.1| 21
Chromatin remodeling complex subunit [Theobroma cacao] gi|508704985|gb|EOX96881.1| 42
14
PREDICTED: LOW QUALITY PROTEIN: PHD and RING finger domain-containing protein 1-like [Glycine max] gi|356562654|ref|XP_003549584.1| 10
PREDICTED: E3 ubiquitin-protein ligase ORTHRUS 2-like [Glycine max] gi|356544236|ref|XP_003540560.1| 27
PREDICTED: pathogenesis-related homeodomain protein-like [Glycine max] gi|356550724|ref|XP_003543734.1| 24
PREDICTED: PHD finger protein ALFIN-LIKE 5-like [Vitis vinifera] gi|359484453|ref|XP_003633111.1| 20
Uncharacterized protein TCM_016489 [Theobroma cacao] gi|508777803|gb|EOY25059.1| 21
PHD4 [Glycine max] gi|351725633|ref|NP_001237867.1| 20
PREDICTED: PHD finger protein At1g33420-like [Glycine max] gi|356535300|ref|XP_003536185.1| 13
PREDICTED: PHD finger protein At1g33420-like [Glycine max] gi|356535300|ref|XP_003536185.1| 13
PHD and RING finger domain-containing protein [Medicago truncatula] gi|357511785|ref|XP_003626181.1| 19
BRCT domain-containing protein [Medicago truncatula] gi|357442293|ref|XP_003591424.1| 20
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein [Arabidopsis thaliana] gi|334186543|ref|NP_193228.6| 17
PREDICTED: pathogenesis-related homeodomain protein-like isoform X1 [Cicer arietinum] gi|502120282|ref|XP_004496910.1| 23
PREDICTED: pathogenesis-related homeodomain protein-like isoform X1 [Cicer arietinum] gi|502120282|ref|XP_004496910.1| 23
PHD finger protein [Zea mays] gi|195637710|gb|ACG38323.1| 20
PREDICTED: pathogenesis-related homeodomain protein-like [Cicer arietinum] gi|502085745|ref|XP_004487993.1| 24
PREDICTED: pathogenesis-related homeodomain protein-like [Cicer arietinum] gi|502085745|ref|XP_004487993.1| 24
PREDICTED: protein AF-17-like isoform X2 [Cicer arietinum] gi|502166098|ref|XP_004513789.1| 16
PREDICTED: protein AF-17-like isoform X1 [Cicer arietinum] gi|502166095|ref|XP_004513788.1| 16
RING/FYVE/PHD zinc finger protein; TAIR: AT5G58610.4 PHD finger transcription factor; Swiss-Prot: sp|F4IXE7|IDM1_ARATH Increased DNA methylation 1; TrEMBL-Plants: tr|G7JZJ8|G7JZJ8_MEDTR PHD zinc finger protein; Found in the gene: LotjaGi1g1v0118400_LC 26
PHD finger protein family; TAIR: AT2G40770.1 RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein; Swiss-Prot: sp|Q149N8|SHPRH_HUMAN E3 ubiquitin-protein ligase SHPRH; TrEMBL-Plants: tr|A0A1J7GV35|A0A1J7GV35_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0130300_LC 14
PHD-finger protein; TAIR: AT1G77250.1 RING/FYVE/PHD-type zinc finger family protein; Swiss-Prot: sp|Q6ZJM9|EHD3_ORYSJ PHD finger protein EHD3; TrEMBL-Plants: tr|A0A1J7H7M4|A0A1J7H7M4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0162700 13
Histone-lysine N-methyltransferase; TAIR: AT5G24330.1 TRITHORAX-RELATED PROTEIN 6; Swiss-Prot: sp|Q9FNE9|ATXR6_ARATH Histone-lysine N-methyltransferase ATXR6; TrEMBL-Plants: tr|V7B478|V7B478_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0165100 17
Histone-lysine N-methyltransferase; TAIR: AT4G27910.1 SET domain protein 16; Swiss-Prot: sp|Q9SUE7|ATX4_ARATH Histone-lysine N-methyltransferase ATX4; TrEMBL-Plants: tr|A0A0B2QWA4|A0A0B2QWA4_GLYSO Histone-lysine N-methyltransferase; Found in the gene: LotjaGi1g1v0226000_LC 13
Histone-lysine N-methyltransferase; TAIR: AT4G27910.1 SET domain protein 16; Swiss-Prot: sp|Q9SUE7|ATX4_ARATH Histone-lysine N-methyltransferase ATX4; TrEMBL-Plants: tr|I1JYS9|I1JYS9_SOYBN Histone-lysine N-methyltransferase; Found in the gene: LotjaGi1g1v0226000_LC 11
Histone-lysine N-methyltransferase; TAIR: AT5G53430.1 SET domain group 29; Swiss-Prot: sp|Q8GZ42|ATX5_ARATH Histone-lysine N-methyltransferase ATX5; TrEMBL-Plants: tr|I1JYS9|I1JYS9_SOYBN Histone-lysine N-methyltransferase; Found in the gene: LotjaGi1g1v0284200 38
Histone-lysine N-methyltransferase; TAIR: AT5G09790.1 TRITHORAX-RELATED PROTEIN 5; Swiss-Prot: sp|B9RU15|ATXR5_RICCO Probable Histone-lysine N-methyltransferase ATXR5; TrEMBL-Plants: tr|I1JY36|I1JY36_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0317200 19
PHD finger alfin-like protein; TAIR: AT5G20510.1 alfin-like 5; Swiss-Prot: sp|Q5XEM9|ALFL5_ARATH PHD finger protein ALFIN-LIKE 5; TrEMBL-Plants: tr|I3T3M7|I3T3M7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0369600 20
PHD finger alfin-like protein; TAIR: AT5G20510.1 alfin-like 5; Swiss-Prot: sp|Q5XEM9|ALFL5_ARATH PHD finger protein ALFIN-LIKE 5; TrEMBL-Plants: tr|I3T3M7|I3T3M7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0369600 15
PHD finger alfin-like protein; TAIR: AT5G20510.1 alfin-like 5; Swiss-Prot: sp|Q5XEM9|ALFL5_ARATH PHD finger protein ALFIN-LIKE 5; TrEMBL-Plants: tr|I3T3M7|I3T3M7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0369600 20
Chromatin remodeling factor CHD3 (Pickle); TAIR: AT2G25170.2 chromatin remodeling factor CHD3 (PICKLE); Swiss-Prot: sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE; TrEMBL-Plants: tr|A0A151TT78|A0A151TT78_CAJCA CHD3-type chromatin-remodeling factor PICKLE; Found in the gene: LotjaGi1g1v0378800 46
Chromatin remodeling factor CHD3 (Pickle); TAIR: AT2G25170.1 chromatin remodeling factor CHD3 (PICKLE); Swiss-Prot: sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE; TrEMBL-Plants: tr|A0A151TT78|A0A151TT78_CAJCA CHD3-type chromatin-remodeling factor PICKLE; Found in the gene: LotjaGi1g1v0378800 46
Chromatin remodeling factor CHD3 (Pickle); TAIR: AT2G25170.2 chromatin remodeling factor CHD3 (PICKLE); Swiss-Prot: sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE; TrEMBL-Plants: tr|A0A151TT78|A0A151TT78_CAJCA CHD3-type chromatin-remodeling factor PICKLE; Found in the gene: LotjaGi1g1v0378800 46
PHD finger alfin-like protein; TAIR: AT5G05610.1 alfin-like 1; Swiss-Prot: sp|A2Y0Q2|ALFL1_ORYSI PHD finger protein ALFIN-LIKE 1; TrEMBL-Plants: tr|C6T7X8|C6T7X8_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0441700 20
PHD finger alfin-like protein; TAIR: AT5G05610.1 alfin-like 1; Swiss-Prot: sp|Q9FFF5|ALFL1_ARATH PHD finger protein ALFIN-LIKE 1; TrEMBL-Plants: tr|C6T7X8|C6T7X8_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0441700 15
Zinc finger, PHD-finger; TAIR: AT2G19260.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|Q9P1Y6|PHRF1_HUMAN PHD and RING finger domain-containing protein 1; TrEMBL-Plants: tr|I1K6W5|I1K6W5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0556600 13
Zinc finger, PHD-finger; TAIR: AT2G19260.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|Q9P1Y6|PHRF1_HUMAN PHD and RING finger domain-containing protein 1; TrEMBL-Plants: tr|K7KHD4|K7KHD4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0556600 16
BAH-PHD domain-containing protein; TAIR: AT4G39100.1 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein; Swiss-Prot: sp|Q9FEN9|SHL_ARATH Chromatin remodeling protein SHL; TrEMBL-Plants: tr|I1K738|I1K738_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0564200 22
RING/FYVE/PHD zinc finger protein; TAIR: AT2G36720.1 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein; Swiss-Prot: sp|F4IXE7|IDM1_ARATH Increased DNA methylation 1; TrEMBL-Plants: tr|K7MZ48|K7MZ48_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0683900 20
RING/U-box superfamily protein; TAIR: AT3G05670.1 RING/U-box protein; Swiss-Prot: sp|Q9P1Y6|PHRF1_HUMAN PHD and RING finger domain-containing protein 1; TrEMBL-Plants: tr|A0A1J7GZV4|A0A1J7GZV4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0746800 21
Methyl-CpG-binding domain-containing protein 9; TAIR: AT3G01460.1 methyl-CPG-binding domain 9; Swiss-Prot: sp|Q9SGH2|MBD9_ARATH Methyl-CpG-binding domain-containing protein 9; TrEMBL-Plants: tr|I1M022|I1M022_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0248100 32
PHD finger protein family; TAIR: AT5G22260.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|Q9FMS5|MS1_ARATH PHD finger protein MALE STERILITY 1; TrEMBL-Plants: tr|A0A151QSK5|A0A151QSK5_CAJCA PHD finger protein family; Found in the gene: LotjaGi2g1v0303400 13
E3 SUMO-protein ligase SIZ1; TAIR: AT5G60410.1 DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain-containing protein; Swiss-Prot: sp|Q680Q4|SIZ1_ARATH E3 SUMO-protein ligase SIZ1; TrEMBL-Plants: tr|G7JQG1|G7JQG1_MEDTR E3 SUMO-protein ligase SIZ1; Found in the gene: LotjaGi2g1v0362700 25
Lysine-specific demethylase; TAIR: AT1G63490.4 transcription factor jumonji (jmjC) domain-containing protein; Swiss-Prot: sp|P29375|KDM5A_HUMAN Lysine-specific demethylase 5A; TrEMBL-Plants: tr|K7LMP3|K7LMP3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0433900 40
Lysine-specific demethylase; TAIR: AT1G63490.4 transcription factor jumonji (jmjC) domain-containing protein; Swiss-Prot: sp|P29375|KDM5A_HUMAN Lysine-specific demethylase 5A; TrEMBL-Plants: tr|K7LMP3|K7LMP3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0433900 41
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein, putative; TAIR: AT4G14920.3 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; Swiss-Prot: sp|F4IXE7|IDM1_ARATH Increased DNA methylation 1; TrEMBL-Plants: tr|V7CG62|V7CG62_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0455500_LC 17
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein, putative; TAIR: AT4G14920.3 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; Swiss-Prot: sp|F4IXE7|IDM1_ARATH Increased DNA methylation 1; TrEMBL-Plants: tr|I1LFT6|I1LFT6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0455500_LC 18
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein, putative; TAIR: AT4G14920.3 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; Swiss-Prot: sp|F4IXE7|IDM1_ARATH Increased DNA methylation 1; TrEMBL-Plants: tr|I1LFT6|I1LFT6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0455500_LC 18
PHD finger alfin-like protein; TAIR: AT3G42790.1 alfin-like 3; Swiss-Prot: sp|Q9M2B4|ALFL3_ARATH PHD finger protein ALFIN-LIKE 3; TrEMBL-Plants: tr|I3T930|I3T930_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0029200 17
Protein strawberry notch like 1; TAIR: AT1G79350.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|F4IF36|FGT1_ARATH Protein FORGETTER 1; TrEMBL-Plants: tr|A0A072TQ60|A0A072TQ60_MEDTR RING/FYVE/PHD zinc finger protein; Found in the gene: LotjaGi3g1v0034000 23
Protein strawberry notch like 1; TAIR: AT1G79350.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|F4IF36|FGT1_ARATH Protein FORGETTER 1; TrEMBL-Plants: tr|A0A072TQ60|A0A072TQ60_MEDTR RING/FYVE/PHD zinc finger protein; Found in the gene: LotjaGi3g1v0034000 23
Histone-lysine N-methyltransferase; TAIR: AT3G14740.2 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|O54826|AF10_MOUSE Protein AF-10; TrEMBL-Plants: tr|A0A1J7H9J1|A0A1J7H9J1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0038900 19
Histone-lysine N-methyltransferase; TAIR: AT3G14740.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|P55197|AF10_HUMAN Protein AF-10; TrEMBL-Plants: tr|A0A1J7H9J1|A0A1J7H9J1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0038900 19
BAH-PHD domain-containing protein; TAIR: AT4G22140.2 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein; Swiss-Prot: sp|F4JL28|EBS_ARATH Chromatin remodeling protein EBS; TrEMBL-Plants: tr|I1M332|I1M332_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0043800 20
BAH-PHD domain-containing protein; TAIR: AT4G22140.2 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein; Swiss-Prot: sp|F4JL28|EBS_ARATH Chromatin remodeling protein EBS; TrEMBL-Plants: tr|I1M332|I1M332_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0043800 20
BAH-PHD domain-containing protein; TAIR: AT4G22140.1 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein; Swiss-Prot: sp|F4JL28|EBS_ARATH Chromatin remodeling protein EBS; TrEMBL-Plants: tr|I1M332|I1M332_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0043800 19
BAH-PHD domain-containing protein; TAIR: AT4G22140.1 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein; Swiss-Prot: sp|F4JL28|EBS_ARATH Chromatin remodeling protein EBS; TrEMBL-Plants: tr|A0A0B2RYF3|A0A0B2RYF3_GLYSO BAH and coiled-coil domain-containing protein 1; Found in the gene: LotjaGi3g1v0043800 20
Protein strawberry notch like 1; TAIR: AT1G79350.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|F4IF36|FGT1_ARATH Protein FORGETTER 1; TrEMBL-Plants: tr|A0A072TQ60|A0A072TQ60_MEDTR RING/FYVE/PHD zinc finger protein; Found in the gene: LotjaGi3g1v0131700 24
PHD finger family protein; TAIR: AT5G44800.1 chromatin remodeling 4; Swiss-Prot: sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4; TrEMBL-Plants: tr|K7KPZ4|K7KPZ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0134000_LC 15
PHD finger family protein; TAIR: AT5G44800.1 chromatin remodeling 4; Swiss-Prot: sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4; TrEMBL-Plants: tr|A0A176VP64|A0A176VP64_MARPO Uncharacterized protein; Found in the gene: LotjaGi3g1v0147600_LC 15
PHD finger family protein; TAIR: AT5G44800.1 chromatin remodeling 4; Swiss-Prot: sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4; TrEMBL-Plants: tr|A0A176VP64|A0A176VP64_MARPO Uncharacterized protein; Found in the gene: LotjaGi3g1v0147600_LC 15
PHD finger family protein; TAIR: AT5G44800.1 chromatin remodeling 4; Swiss-Prot: sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4; TrEMBL-Plants: tr|A0A176VP64|A0A176VP64_MARPO Uncharacterized protein; Found in the gene: LotjaGi3g1v0147700_LC 15
BAH-PHD domain-containing protein; TAIR: AT4G22140.2 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein; Swiss-Prot: sp|F4JL28|EBS_ARATH Chromatin remodeling protein EBS; TrEMBL-Plants: tr|I3S5U2|I3S5U2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0154700 22
BAH-PHD domain-containing protein; TAIR: AT4G22140.1 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein; Swiss-Prot: sp|F4JL28|EBS_ARATH Chromatin remodeling protein EBS; TrEMBL-Plants: tr|I3S5U2|I3S5U2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0154700 20
BAH-PHD domain-containing protein; TAIR: AT4G22140.1 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein; Swiss-Prot: sp|F4JL28|EBS_ARATH Chromatin remodeling protein EBS; TrEMBL-Plants: tr|I3S5U2|I3S5U2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0154700 20
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; TAIR: AT3G14980.1 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; Swiss-Prot: sp|F4IXE7|IDM1_ARATH Increased DNA methylation 1; TrEMBL-Plants: tr|A0A072VAI1|A0A072VAI1_MEDTR RING/FYVE/PHD zinc finger protein; Found in the gene: LotjaGi3g1v0158900 21
PHD finger alfin-like protein; TAIR: AT5G05610.1 alfin-like 1; Swiss-Prot: sp|A2Y0Q2|ALFL1_ORYSI PHD finger protein ALFIN-LIKE 1; TrEMBL-Plants: tr|I3SZL0|I3SZL0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0208200 20
PHD finger alfin-like protein; TAIR: AT5G05610.1 alfin-like 1; Swiss-Prot: sp|Q9FFF5|ALFL1_ARATH PHD finger protein ALFIN-LIKE 1; TrEMBL-Plants: tr|I3SZL0|I3SZL0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0208200 21
Origin recognition complex subunit 1; TAIR: AT4G14700.1 origin recognition complex 1; Swiss-Prot: sp|Q710E8|ORC1A_ARATH Origin of replication complex subunit 1A; TrEMBL-Plants: tr|I1M507|I1M507_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0287800 29
Origin recognition complex subunit 1; TAIR: AT4G14700.1 origin recognition complex 1; Swiss-Prot: sp|Q710E8|ORC1A_ARATH Origin of replication complex subunit 1A; TrEMBL-Plants: tr|I1M507|I1M507_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0287800 29
Origin recognition complex subunit 1; TAIR: AT4G14700.1 origin recognition complex 1; Swiss-Prot: sp|Q710E8|ORC1A_ARATH Origin of replication complex subunit 1A; TrEMBL-Plants: tr|I1M507|I1M507_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0287800 29
Histone acetyltransferase; TAIR: AT1G16710.10 histone acetyltransferase of the CBP family 12; Swiss-Prot: sp|Q9FWQ5|HAC12_ARATH Histone acetyltransferase HAC12; TrEMBL-Plants: tr|I1KG14|I1KG14_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0338000 32
Histone acetyltransferase; TAIR: AT1G16710.10 histone acetyltransferase of the CBP family 12; Swiss-Prot: sp|Q9FWQ5|HAC12_ARATH Histone acetyltransferase HAC12; TrEMBL-Plants: tr|I1KG14|I1KG14_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0338000 32
Histone acetyltransferase; TAIR: AT1G16710.10 histone acetyltransferase of the CBP family 12; Swiss-Prot: sp|Q9FWQ5|HAC12_ARATH Histone acetyltransferase HAC12; TrEMBL-Plants: tr|I1KG14|I1KG14_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0338000 32
Histone acetyltransferase; TAIR: AT1G16710.4 histone acetyltransferase of the CBP family 12; Swiss-Prot: sp|Q9C5X9|HAC1_ARATH Histone acetyltransferase HAC1; TrEMBL-Plants: tr|K7KYS1|K7KYS1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0338000 32
Histone acetyltransferase; TAIR: AT1G16710.10 histone acetyltransferase of the CBP family 12; Swiss-Prot: sp|Q9FWQ5|HAC12_ARATH Histone acetyltransferase HAC12; TrEMBL-Plants: tr|I1KG14|I1KG14_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0338000 32
Histone-lysine N-methyltransferase; TAIR: AT3G61740.2 SET domain protein 14; Swiss-Prot: sp|Q9M364|ATX3_ARATH Histone-lysine N-methyltransferase ATX3; TrEMBL-Plants: tr|A0A151SIL1|A0A151SIL1_CAJCA Histone-lysine N-methyltransferase; Found in the gene: LotjaGi3g1v0394900 38
PHD finger alfin-like protein; TAIR: AT5G20510.1 alfin-like 5; Swiss-Prot: sp|Q5XEM9|ALFL5_ARATH PHD finger protein ALFIN-LIKE 5; TrEMBL-Plants: tr|I1MJY1|I1MJY1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0417800 20
PHD finger alfin-like protein; TAIR: AT5G20510.1 alfin-like 5; Swiss-Prot: sp|Q5XEM9|ALFL5_ARATH PHD finger protein ALFIN-LIKE 5; TrEMBL-Plants: tr|A0A151T9G0|A0A151T9G0_CAJCA PHD finger protein family; Found in the gene: LotjaGi3g1v0417800 20
Nucleosome-remodeling factor subunit BPTF; TAIR: AT5G22760.1 PHD finger family protein; Swiss-Prot: sp|F4JYC8|PTM_ARATH DDT domain-containing protein PTM; TrEMBL-Plants: tr|A0A1J7GFU1|A0A1J7GFU1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0481400 22
Nucleosome-remodeling factor subunit; TAIR: AT5G12400.1 PHD-finger and DNA binding domain-containing protein; Swiss-Prot: sp|F4JYC8|PTM_ARATH DDT domain-containing protein PTM; TrEMBL-Plants: tr|A0A0B2PNJ8|A0A0B2PNJ8_GLYSO Nucleosome-remodeling factor subunit NURF301; Found in the gene: LotjaGi3g1v0534700 19
Nucleosome-remodeling factor subunit; TAIR: AT5G12400.1 PHD-finger and DNA binding domain-containing protein; Swiss-Prot: sp|F4JYC8|PTM_ARATH DDT domain-containing protein PTM; TrEMBL-Plants: tr|K7LNU7|K7LNU7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0534700 19
PHD finger protein family; TAIR: AT1G33420.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|Q9C810|Y1342_ARATH PHD finger protein At1g33420; TrEMBL-Plants: tr|A0A151TNX9|A0A151TNX9_CAJCA PHD finger protein family; Found in the gene: LotjaGi3g1v0555100 15
PHD finger alfin-like protein; TAIR: AT2G02470.1 alfin-like 6; Swiss-Prot: sp|Q40359|ALFIN_MEDSA PHD finger protein Alfin1; TrEMBL-Plants: tr|K7L425|K7L425_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0002700 20
Chromodomain-helicase-DNA-binding family protein; TAIR: AT5G44800.1 chromatin remodeling 4; Swiss-Prot: sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4; TrEMBL-Plants: tr|K7KPZ4|K7KPZ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0022000 46
RING/FYVE/PHD zinc finger protein, putative; TAIR: AT1G05380.1 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; Swiss-Prot: sp|F4IXE7|IDM1_ARATH Increased DNA methylation 1; TrEMBL-Plants: tr|V7B190|V7B190_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0198800_LC 23
RING/FYVE/PHD zinc finger protein, putative; TAIR: AT4G14920.1 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; Swiss-Prot: sp|F4IXE7|IDM1_ARATH Increased DNA methylation 1; TrEMBL-Plants: tr|V7B190|V7B190_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0198800_LC 17
RING/U-box protein; TAIR: AT3G05670.1 RING/U-box protein; Swiss-Prot: sp|Q63625|PHRF1_RAT PHD and RING finger domain-containing protein 1; TrEMBL-Plants: tr|A0A072UQF4|A0A072UQF4_MEDTR PHD-finger protein, putative; Found in the gene: LotjaGi4g1v0257700 19
Pathogenesis-related homeodomain protein; TAIR: AT4G29940.1 pathogenesis related homeodomain protein A; Swiss-Prot: sp|P48785|PRH_ARATH Pathogenesis-related homeodomain protein; TrEMBL-Plants: tr|A0A151SRV5|A0A151SRV5_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0305500 24
PHD finger alfin-like protein; TAIR: AT5G20510.1 alfin-like 5; Swiss-Prot: sp|Q5XEM9|ALFL5_ARATH PHD finger protein ALFIN-LIKE 5; TrEMBL-Plants: tr|I3SD19|I3SD19_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0327700 21
RING/U-box protein; TAIR: AT4G10930.1 RING/U-box protein; Swiss-Prot: sp|Q8L7I1|Y4193_ARATH Uncharacterized protein At4g10930; TrEMBL-Plants: tr|K7L4K2|K7L4K2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0436600 20
PHD finger alfin-like protein; TAIR: AT5G20510.1 alfin-like 5; Swiss-Prot: sp|Q5XEM9|ALFL5_ARATH PHD finger protein ALFIN-LIKE 5; TrEMBL-Plants: tr|B9IKC9|B9IKC9_POPTR PHD finger family protein; Found in the gene: LotjaGi5g1v0047100 20
PHD finger alfin-like protein; TAIR: AT5G20510.1 alfin-like 5; Swiss-Prot: sp|Q5XEM9|ALFL5_ARATH PHD finger protein ALFIN-LIKE 5; TrEMBL-Plants: tr|B9IKC9|B9IKC9_POPTR PHD finger family protein; Found in the gene: LotjaGi5g1v0047100 20
PHD finger alfin-like protein; TAIR: AT3G42790.1 alfin-like 3; Swiss-Prot: sp|Q9M2B4|ALFL3_ARATH PHD finger protein ALFIN-LIKE 3; TrEMBL-Plants: tr|D7TCI6|D7TCI6_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0047100 20
PHD finger protein family; TAIR: AT1G33420.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|Q9C810|Y1342_ARATH PHD finger protein At1g33420; TrEMBL-Plants: tr|V7BEA4|V7BEA4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0196300 13
Ring PHD family protein; TAIR: AT3G05670.1 RING/U-box protein; Swiss-Prot: sp|Q9P1Y6|PHRF1_HUMAN PHD and RING finger domain-containing protein 1; TrEMBL-Plants: tr|A0A1J7GZV4|A0A1J7GZV4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0228100_LC 21
Ring PHD family protein; TAIR: AT3G05670.1 RING/U-box protein; Swiss-Prot: sp|Q9P1Y6|PHRF1_HUMAN PHD and RING finger domain-containing protein 1; TrEMBL-Plants: tr|A0A1J7GZV4|A0A1J7GZV4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0228100_LC 20
BRCT domain-containing protein family; TAIR: AT4G02110.2 transcription coactivator; Swiss-Prot: sp|O04251|Y4211_ARATH BRCT domain-containing protein At4g02110; TrEMBL-Plants: tr|A0A072VP53|A0A072VP53_MEDTR DNA replication regulator dpb11, putative; Found in the gene: LotjaGi5g1v0246200 23
BRCT domain-containing protein family; TAIR: AT4G02110.2 transcription coactivator; Swiss-Prot: sp|O04251|Y4211_ARATH BRCT domain-containing protein At4g02110; TrEMBL-Plants: tr|A0A072VP53|A0A072VP53_MEDTR DNA replication regulator dpb11, putative; Found in the gene: LotjaGi5g1v0246200 24
BAH-PHD domain-containing protein; TAIR: AT4G22140.2 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein; Swiss-Prot: sp|F4JL28|EBS_ARATH Chromatin remodeling protein EBS; TrEMBL-Plants: tr|A0A1J7FWH1|A0A1J7FWH1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0307200 19
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein, putative; TAIR: AT4G14920.1 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; Swiss-Prot: sp|F4IXE7|IDM1_ARATH Increased DNA methylation 1; TrEMBL-Plants: tr|A0A072VQ30|A0A072VQ30_MEDTR RING/FYVE/PHD zinc finger protein, putative; Found in the gene: LotjaGi5g1v0313800 17
Homeobox protein; TAIR: AT3G19510.1 Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain-containing protein; Swiss-Prot: sp|Q8H991|HAZ1_ORYSJ Homeobox protein HAZ1; TrEMBL-Plants: tr|A0A1J7G9R1|A0A1J7G9R1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0325600 23
Homeobox protein; TAIR: AT3G19510.1 Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain-containing protein; Swiss-Prot: sp|Q8H991|HAZ1_ORYSJ Homeobox protein HAZ1; TrEMBL-Plants: tr|A0A1J7G9R1|A0A1J7G9R1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0325600 23
RING/FYVE/PHD zinc finger protein; TAIR: AT5G58610.3 PHD finger transcription factor; Swiss-Prot: sp|F4IXE7|IDM1_ARATH Increased DNA methylation 1; TrEMBL-Plants: tr|A0A1J7H9H6|A0A1J7H9H6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0122700_LC 27
RING/FYVE/PHD zinc finger protein; TAIR: AT5G58610.4 PHD finger transcription factor; Swiss-Prot: sp|F4IXE7|IDM1_ARATH Increased DNA methylation 1; TrEMBL-Plants: tr|A0A1J7H9H6|A0A1J7H9H6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0122700_LC 27
RING/FYVE/PHD zinc finger protein; TAIR: AT5G58610.4 PHD finger transcription factor; Swiss-Prot: sp|F4IXE7|IDM1_ARATH Increased DNA methylation 1; TrEMBL-Plants: tr|A0A1J7H9H6|A0A1J7H9H6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0122700_LC 28
PHD finger alfin-like protein; TAIR: AT3G42790.1 alfin-like 3; Swiss-Prot: sp|Q7XUW3|ALFL4_ORYSJ PHD finger protein ALFIN-LIKE 4; TrEMBL-Plants: tr|A0A1J7I2R7|A0A1J7I2R7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0227400 21
Pathogenesis-related homeodomain protein; TAIR: AT4G29940.1 pathogenesis related homeodomain protein A; Swiss-Prot: sp|P48785|PRH_ARATH Pathogenesis-related homeodomain protein; TrEMBL-Plants: tr|K7MBU2|K7MBU2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0235500 25

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 0.67