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PHD-finger
Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | PHD and RING finger domain-containing protein [Medicago truncatula] gi|357511785|ref|XP_003626181.1| | 19 | ||
– | PREDICTED: histone-lysine N-methyltransferase ATX4-like [Glycine max] gi|356518627|ref|XP_003527980.1| | 31 | ||
– | PREDICTED: BAH and coiled-coil domain-containing protein 1-like [Glycine max] gi|356543233|ref|XP_003540067.1| | 18 | ||
– | PREDICTED: BAH and coiled-coil domain-containing protein 1-like [Glycine max] gi|356516937|ref|XP_003527148.1| | 17 | ||
– | Chromodomain helicase-DNA-binding protein [Medicago truncatula] gi|357490843|ref|XP_003615709.1| | 11 | ||
– | PHD finger transcription factor-like [Oryza sativa Japonica Group] gi|34394455|dbj|BAC83629.1| | 15 | ||
– | DNA binding protein [Arabidopsis lyrata subsp]. lyrata] gi|297843332|ref|XP_002889547.1| | 21 | ||
– | PREDICTED: LOW QUALITY PROTEIN: histone acetyltransferase HAC1-like [Cicer arietinum] gi|502089455|ref|XP_004488916.1| | 28 | ||
– | Chromatin remodeling 4 protein [Arabidopsis thaliana] gi|334188199|ref|NP_199293.3| | 12 | ||
– | PREDICTED: PHD finger protein ALFIN-LIKE 1-like [Cicer arietinum] gi|502147358|ref|XP_004506752.1| | 20 | ||
– | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein [Arabidopsis thaliana] gi|334186543|ref|NP_193228.6| | 19 | ||
– | RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gi|42563280|ref|NP_177849.2| | 14 | ||
– | PREDICTED: histone-lysine N-methyltransferase ATXR5-like [Cicer arietinum] gi|502136971|ref|XP_004502916.1| | 11 | ||
– | PHD4 [Glycine max] gi|351725633|ref|NP_001237867.1| | 20 | ||
– | PREDICTED: PHD finger protein ALFIN-LIKE 1-like [Cicer arietinum] gi|502147358|ref|XP_004506752.1| | 20 | ||
– | PREDICTED: BAH and coiled-coil domain-containing protein 1-like [Glycine max] gi|356516937|ref|XP_003527148.1| | 18 | ||
– | PREDICTED: LOW QUALITY PROTEIN: histone-lysine N-methyltransferase ATXR6-like [Cicer arietinum] gi|502124379|ref|XP_004498502.1| | 13 | ||
– | Inhibitor of growth protein [Medicago truncatula] gi|357508653|ref|XP_003624615.1| | 16 | ||
– | Chromodomain-helicase-DNA-binding protein [Medicago truncatula] gi|357510879|ref|XP_003625728.1| | 20 | ||
– | PREDICTED: bromodomain adjacent to zinc finger domain protein 1A-like isoform X1 [Cicer arietinum] gi|502113145|ref|XP_004494555.1| | 21 | ||
– | PREDICTED: methyl-CpG-binding domain-containing protein 9-like [Cicer arietinum] gi|502090713|ref|XP_004489317.1| | 32 | ||
– | Lysine-specific demethylase 5D [Medicago truncatula] gi|357481615|ref|XP_003611093.1| | 13 | ||
– | Lysine-specific demethylase 5D [Medicago truncatula] gi|357481617|ref|XP_003611094.1| | 35 | ||
– | Chromodomain helicase-DNA-binding protein [Medicago truncatula] gi|357490843|ref|XP_003615709.1| | 20 | ||
– | PHD finger protein [Medicago truncatula] gi|357494725|ref|XP_003617651.1| | 18 | ||
– | PREDICTED: PHD finger protein ALFIN-LIKE 4-like [Cicer arietinum] gi|502081422|ref|XP_004486862.1| | 17 | ||
– | PREDICTED: BAH and coiled-coil domain-containing protein 1-like [Glycine max] gi|356543233|ref|XP_003540067.1| | 17 | ||
– | PREDICTED: protein strawberry notch homolog 1-like [Cicer arietinum] gi|502087519|ref|XP_004488559.1| | 21 | ||
– | PREDICTED: protein strawberry notch homolog 1-like [Cicer arietinum] gi|502087519|ref|XP_004488559.1| | 22 | ||
– | Histone H3 acetyltransferase IDM1 [Arabidopsis thaliana] gi|15232453|ref|NP_188116.1| | 20 | ||
– | Chromodomain-helicase-DNA-binding protein [Medicago truncatula] gi|357472039|ref|XP_003606304.1| | 22 | ||
– | PREDICTED: origin recognition complex subunit 1-like [Glycine max] gi|356557695|ref|XP_003547149.1| | 26 | ||
– | PREDICTED: histone-lysine N-methyltransferase ATX3-like [Glycine max] gi|356522510|ref|XP_003529889.1| | 30 | ||
– | PREDICTED: histone-lysine N-methyltransferase ATX3-like [Glycine max] gi|356522510|ref|XP_003529889.1| | 30 | ||
– | PHD1 [Glycine max] gi|351727220|ref|NP_001237921.1| | 21 | ||
– | Chromodomain-helicase-DNA-binding protein [Medicago truncatula] gi|357472039|ref|XP_003606304.1| | 22 | ||
– | Chromodomain helicase DNA binding protein [Medicago truncatula] gi|357474041|ref|XP_003607305.1| | 21 | ||
– | 13 | |||
– | PREDICTED: PHD finger protein At1g33420-like [Glycine max] gi|356531716|ref|XP_003534422.1| | 15 | ||
– | PHD5 [Glycine max] gi|351726166|ref|NP_001237885.1| | 21 | ||
– | Chromatin remodeling complex subunit [Theobroma cacao] gi|508704985|gb|EOX96881.1| | 42 | ||
– | 14 | |||
– | PREDICTED: LOW QUALITY PROTEIN: PHD and RING finger domain-containing protein 1-like [Glycine max] gi|356562654|ref|XP_003549584.1| | 10 | ||
– | PREDICTED: E3 ubiquitin-protein ligase ORTHRUS 2-like [Glycine max] gi|356544236|ref|XP_003540560.1| | 27 | ||
– | PREDICTED: pathogenesis-related homeodomain protein-like [Glycine max] gi|356550724|ref|XP_003543734.1| | 24 | ||
– | PREDICTED: PHD finger protein ALFIN-LIKE 5-like [Vitis vinifera] gi|359484453|ref|XP_003633111.1| | 20 | ||
– | Uncharacterized protein TCM_016489 [Theobroma cacao] gi|508777803|gb|EOY25059.1| | 21 | ||
– | PHD4 [Glycine max] gi|351725633|ref|NP_001237867.1| | 20 | ||
– | PREDICTED: PHD finger protein At1g33420-like [Glycine max] gi|356535300|ref|XP_003536185.1| | 13 | ||
– | PREDICTED: PHD finger protein At1g33420-like [Glycine max] gi|356535300|ref|XP_003536185.1| | 13 | ||
– | PHD and RING finger domain-containing protein [Medicago truncatula] gi|357511785|ref|XP_003626181.1| | 19 | ||
– | BRCT domain-containing protein [Medicago truncatula] gi|357442293|ref|XP_003591424.1| | 20 | ||
– | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein [Arabidopsis thaliana] gi|334186543|ref|NP_193228.6| | 17 | ||
– | PREDICTED: pathogenesis-related homeodomain protein-like isoform X1 [Cicer arietinum] gi|502120282|ref|XP_004496910.1| | 23 | ||
– | PREDICTED: pathogenesis-related homeodomain protein-like isoform X1 [Cicer arietinum] gi|502120282|ref|XP_004496910.1| | 23 | ||
– | PHD finger protein [Zea mays] gi|195637710|gb|ACG38323.1| | 20 | ||
– | PREDICTED: pathogenesis-related homeodomain protein-like [Cicer arietinum] gi|502085745|ref|XP_004487993.1| | 24 | ||
– | PREDICTED: pathogenesis-related homeodomain protein-like [Cicer arietinum] gi|502085745|ref|XP_004487993.1| | 24 | ||
– | PREDICTED: protein AF-17-like isoform X2 [Cicer arietinum] gi|502166098|ref|XP_004513789.1| | 16 | ||
– | PREDICTED: protein AF-17-like isoform X1 [Cicer arietinum] gi|502166095|ref|XP_004513788.1| | 16 | ||
– | RING/FYVE/PHD zinc finger protein; TAIR: AT5G58610.4 PHD finger transcription factor; Swiss-Prot: sp|F4IXE7|IDM1_ARATH Increased DNA methylation 1; TrEMBL-Plants: tr|G7JZJ8|G7JZJ8_MEDTR PHD zinc finger protein; Found in the gene: LotjaGi1g1v0118400_LC | 26 | ||
– | PHD finger protein family; TAIR: AT2G40770.1 RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein; Swiss-Prot: sp|Q149N8|SHPRH_HUMAN E3 ubiquitin-protein ligase SHPRH; TrEMBL-Plants: tr|A0A1J7GV35|A0A1J7GV35_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0130300_LC | 14 | ||
– | PHD-finger protein; TAIR: AT1G77250.1 RING/FYVE/PHD-type zinc finger family protein; Swiss-Prot: sp|Q6ZJM9|EHD3_ORYSJ PHD finger protein EHD3; TrEMBL-Plants: tr|A0A1J7H7M4|A0A1J7H7M4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0162700 | 13 | ||
– | Histone-lysine N-methyltransferase; TAIR: AT5G24330.1 TRITHORAX-RELATED PROTEIN 6; Swiss-Prot: sp|Q9FNE9|ATXR6_ARATH Histone-lysine N-methyltransferase ATXR6; TrEMBL-Plants: tr|V7B478|V7B478_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0165100 | 17 | ||
– | Histone-lysine N-methyltransferase; TAIR: AT4G27910.1 SET domain protein 16; Swiss-Prot: sp|Q9SUE7|ATX4_ARATH Histone-lysine N-methyltransferase ATX4; TrEMBL-Plants: tr|A0A0B2QWA4|A0A0B2QWA4_GLYSO Histone-lysine N-methyltransferase; Found in the gene: LotjaGi1g1v0226000_LC | 13 | ||
– | Histone-lysine N-methyltransferase; TAIR: AT4G27910.1 SET domain protein 16; Swiss-Prot: sp|Q9SUE7|ATX4_ARATH Histone-lysine N-methyltransferase ATX4; TrEMBL-Plants: tr|I1JYS9|I1JYS9_SOYBN Histone-lysine N-methyltransferase; Found in the gene: LotjaGi1g1v0226000_LC | 11 | ||
– | Histone-lysine N-methyltransferase; TAIR: AT5G53430.1 SET domain group 29; Swiss-Prot: sp|Q8GZ42|ATX5_ARATH Histone-lysine N-methyltransferase ATX5; TrEMBL-Plants: tr|I1JYS9|I1JYS9_SOYBN Histone-lysine N-methyltransferase; Found in the gene: LotjaGi1g1v0284200 | 38 | ||
– | Histone-lysine N-methyltransferase; TAIR: AT5G09790.1 TRITHORAX-RELATED PROTEIN 5; Swiss-Prot: sp|B9RU15|ATXR5_RICCO Probable Histone-lysine N-methyltransferase ATXR5; TrEMBL-Plants: tr|I1JY36|I1JY36_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0317200 | 19 | ||
– | PHD finger alfin-like protein; TAIR: AT5G20510.1 alfin-like 5; Swiss-Prot: sp|Q5XEM9|ALFL5_ARATH PHD finger protein ALFIN-LIKE 5; TrEMBL-Plants: tr|I3T3M7|I3T3M7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0369600 | 20 | ||
– | PHD finger alfin-like protein; TAIR: AT5G20510.1 alfin-like 5; Swiss-Prot: sp|Q5XEM9|ALFL5_ARATH PHD finger protein ALFIN-LIKE 5; TrEMBL-Plants: tr|I3T3M7|I3T3M7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0369600 | 15 | ||
– | PHD finger alfin-like protein; TAIR: AT5G20510.1 alfin-like 5; Swiss-Prot: sp|Q5XEM9|ALFL5_ARATH PHD finger protein ALFIN-LIKE 5; TrEMBL-Plants: tr|I3T3M7|I3T3M7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0369600 | 20 | ||
– | Chromatin remodeling factor CHD3 (Pickle); TAIR: AT2G25170.2 chromatin remodeling factor CHD3 (PICKLE); Swiss-Prot: sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE; TrEMBL-Plants: tr|A0A151TT78|A0A151TT78_CAJCA CHD3-type chromatin-remodeling factor PICKLE; Found in the gene: LotjaGi1g1v0378800 | 46 | ||
– | Chromatin remodeling factor CHD3 (Pickle); TAIR: AT2G25170.1 chromatin remodeling factor CHD3 (PICKLE); Swiss-Prot: sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE; TrEMBL-Plants: tr|A0A151TT78|A0A151TT78_CAJCA CHD3-type chromatin-remodeling factor PICKLE; Found in the gene: LotjaGi1g1v0378800 | 46 | ||
– | Chromatin remodeling factor CHD3 (Pickle); TAIR: AT2G25170.2 chromatin remodeling factor CHD3 (PICKLE); Swiss-Prot: sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE; TrEMBL-Plants: tr|A0A151TT78|A0A151TT78_CAJCA CHD3-type chromatin-remodeling factor PICKLE; Found in the gene: LotjaGi1g1v0378800 | 46 | ||
– | PHD finger alfin-like protein; TAIR: AT5G05610.1 alfin-like 1; Swiss-Prot: sp|A2Y0Q2|ALFL1_ORYSI PHD finger protein ALFIN-LIKE 1; TrEMBL-Plants: tr|C6T7X8|C6T7X8_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0441700 | 20 | ||
– | PHD finger alfin-like protein; TAIR: AT5G05610.1 alfin-like 1; Swiss-Prot: sp|Q9FFF5|ALFL1_ARATH PHD finger protein ALFIN-LIKE 1; TrEMBL-Plants: tr|C6T7X8|C6T7X8_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0441700 | 15 | ||
– | Zinc finger, PHD-finger; TAIR: AT2G19260.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|Q9P1Y6|PHRF1_HUMAN PHD and RING finger domain-containing protein 1; TrEMBL-Plants: tr|I1K6W5|I1K6W5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0556600 | 13 | ||
– | Zinc finger, PHD-finger; TAIR: AT2G19260.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|Q9P1Y6|PHRF1_HUMAN PHD and RING finger domain-containing protein 1; TrEMBL-Plants: tr|K7KHD4|K7KHD4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0556600 | 16 | ||
– | BAH-PHD domain-containing protein; TAIR: AT4G39100.1 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein; Swiss-Prot: sp|Q9FEN9|SHL_ARATH Chromatin remodeling protein SHL; TrEMBL-Plants: tr|I1K738|I1K738_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0564200 | 22 | ||
– | RING/FYVE/PHD zinc finger protein; TAIR: AT2G36720.1 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein; Swiss-Prot: sp|F4IXE7|IDM1_ARATH Increased DNA methylation 1; TrEMBL-Plants: tr|K7MZ48|K7MZ48_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0683900 | 20 | ||
– | RING/U-box superfamily protein; TAIR: AT3G05670.1 RING/U-box protein; Swiss-Prot: sp|Q9P1Y6|PHRF1_HUMAN PHD and RING finger domain-containing protein 1; TrEMBL-Plants: tr|A0A1J7GZV4|A0A1J7GZV4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0746800 | 21 | ||
– | Methyl-CpG-binding domain-containing protein 9; TAIR: AT3G01460.1 methyl-CPG-binding domain 9; Swiss-Prot: sp|Q9SGH2|MBD9_ARATH Methyl-CpG-binding domain-containing protein 9; TrEMBL-Plants: tr|I1M022|I1M022_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0248100 | 32 | ||
– | PHD finger protein family; TAIR: AT5G22260.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|Q9FMS5|MS1_ARATH PHD finger protein MALE STERILITY 1; TrEMBL-Plants: tr|A0A151QSK5|A0A151QSK5_CAJCA PHD finger protein family; Found in the gene: LotjaGi2g1v0303400 | 13 | ||
– | E3 SUMO-protein ligase SIZ1; TAIR: AT5G60410.1 DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain-containing protein; Swiss-Prot: sp|Q680Q4|SIZ1_ARATH E3 SUMO-protein ligase SIZ1; TrEMBL-Plants: tr|G7JQG1|G7JQG1_MEDTR E3 SUMO-protein ligase SIZ1; Found in the gene: LotjaGi2g1v0362700 | 25 | ||
– | Lysine-specific demethylase; TAIR: AT1G63490.4 transcription factor jumonji (jmjC) domain-containing protein; Swiss-Prot: sp|P29375|KDM5A_HUMAN Lysine-specific demethylase 5A; TrEMBL-Plants: tr|K7LMP3|K7LMP3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0433900 | 40 | ||
– | Lysine-specific demethylase; TAIR: AT1G63490.4 transcription factor jumonji (jmjC) domain-containing protein; Swiss-Prot: sp|P29375|KDM5A_HUMAN Lysine-specific demethylase 5A; TrEMBL-Plants: tr|K7LMP3|K7LMP3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0433900 | 41 | ||
– | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein, putative; TAIR: AT4G14920.3 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; Swiss-Prot: sp|F4IXE7|IDM1_ARATH Increased DNA methylation 1; TrEMBL-Plants: tr|V7CG62|V7CG62_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0455500_LC | 17 | ||
– | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein, putative; TAIR: AT4G14920.3 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; Swiss-Prot: sp|F4IXE7|IDM1_ARATH Increased DNA methylation 1; TrEMBL-Plants: tr|I1LFT6|I1LFT6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0455500_LC | 18 | ||
– | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein, putative; TAIR: AT4G14920.3 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; Swiss-Prot: sp|F4IXE7|IDM1_ARATH Increased DNA methylation 1; TrEMBL-Plants: tr|I1LFT6|I1LFT6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0455500_LC | 18 | ||
– | PHD finger alfin-like protein; TAIR: AT3G42790.1 alfin-like 3; Swiss-Prot: sp|Q9M2B4|ALFL3_ARATH PHD finger protein ALFIN-LIKE 3; TrEMBL-Plants: tr|I3T930|I3T930_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0029200 | 17 | ||
– | Protein strawberry notch like 1; TAIR: AT1G79350.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|F4IF36|FGT1_ARATH Protein FORGETTER 1; TrEMBL-Plants: tr|A0A072TQ60|A0A072TQ60_MEDTR RING/FYVE/PHD zinc finger protein; Found in the gene: LotjaGi3g1v0034000 | 23 | ||
– | Protein strawberry notch like 1; TAIR: AT1G79350.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|F4IF36|FGT1_ARATH Protein FORGETTER 1; TrEMBL-Plants: tr|A0A072TQ60|A0A072TQ60_MEDTR RING/FYVE/PHD zinc finger protein; Found in the gene: LotjaGi3g1v0034000 | 23 | ||
– | Histone-lysine N-methyltransferase; TAIR: AT3G14740.2 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|O54826|AF10_MOUSE Protein AF-10; TrEMBL-Plants: tr|A0A1J7H9J1|A0A1J7H9J1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0038900 | 19 | ||
– | Histone-lysine N-methyltransferase; TAIR: AT3G14740.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|P55197|AF10_HUMAN Protein AF-10; TrEMBL-Plants: tr|A0A1J7H9J1|A0A1J7H9J1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0038900 | 19 | ||
– | BAH-PHD domain-containing protein; TAIR: AT4G22140.2 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein; Swiss-Prot: sp|F4JL28|EBS_ARATH Chromatin remodeling protein EBS; TrEMBL-Plants: tr|I1M332|I1M332_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0043800 | 20 | ||
– | BAH-PHD domain-containing protein; TAIR: AT4G22140.2 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein; Swiss-Prot: sp|F4JL28|EBS_ARATH Chromatin remodeling protein EBS; TrEMBL-Plants: tr|I1M332|I1M332_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0043800 | 20 | ||
– | BAH-PHD domain-containing protein; TAIR: AT4G22140.1 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein; Swiss-Prot: sp|F4JL28|EBS_ARATH Chromatin remodeling protein EBS; TrEMBL-Plants: tr|I1M332|I1M332_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0043800 | 19 | ||
– | BAH-PHD domain-containing protein; TAIR: AT4G22140.1 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein; Swiss-Prot: sp|F4JL28|EBS_ARATH Chromatin remodeling protein EBS; TrEMBL-Plants: tr|A0A0B2RYF3|A0A0B2RYF3_GLYSO BAH and coiled-coil domain-containing protein 1; Found in the gene: LotjaGi3g1v0043800 | 20 | ||
– | Protein strawberry notch like 1; TAIR: AT1G79350.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|F4IF36|FGT1_ARATH Protein FORGETTER 1; TrEMBL-Plants: tr|A0A072TQ60|A0A072TQ60_MEDTR RING/FYVE/PHD zinc finger protein; Found in the gene: LotjaGi3g1v0131700 | 24 | ||
– | PHD finger family protein; TAIR: AT5G44800.1 chromatin remodeling 4; Swiss-Prot: sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4; TrEMBL-Plants: tr|K7KPZ4|K7KPZ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0134000_LC | 15 | ||
– | PHD finger family protein; TAIR: AT5G44800.1 chromatin remodeling 4; Swiss-Prot: sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4; TrEMBL-Plants: tr|A0A176VP64|A0A176VP64_MARPO Uncharacterized protein; Found in the gene: LotjaGi3g1v0147600_LC | 15 | ||
– | PHD finger family protein; TAIR: AT5G44800.1 chromatin remodeling 4; Swiss-Prot: sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4; TrEMBL-Plants: tr|A0A176VP64|A0A176VP64_MARPO Uncharacterized protein; Found in the gene: LotjaGi3g1v0147600_LC | 15 | ||
– | PHD finger family protein; TAIR: AT5G44800.1 chromatin remodeling 4; Swiss-Prot: sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4; TrEMBL-Plants: tr|A0A176VP64|A0A176VP64_MARPO Uncharacterized protein; Found in the gene: LotjaGi3g1v0147700_LC | 15 | ||
– | BAH-PHD domain-containing protein; TAIR: AT4G22140.2 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein; Swiss-Prot: sp|F4JL28|EBS_ARATH Chromatin remodeling protein EBS; TrEMBL-Plants: tr|I3S5U2|I3S5U2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0154700 | 22 | ||
– | BAH-PHD domain-containing protein; TAIR: AT4G22140.1 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein; Swiss-Prot: sp|F4JL28|EBS_ARATH Chromatin remodeling protein EBS; TrEMBL-Plants: tr|I3S5U2|I3S5U2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0154700 | 20 | ||
– | BAH-PHD domain-containing protein; TAIR: AT4G22140.1 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein; Swiss-Prot: sp|F4JL28|EBS_ARATH Chromatin remodeling protein EBS; TrEMBL-Plants: tr|I3S5U2|I3S5U2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0154700 | 20 | ||
– | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; TAIR: AT3G14980.1 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; Swiss-Prot: sp|F4IXE7|IDM1_ARATH Increased DNA methylation 1; TrEMBL-Plants: tr|A0A072VAI1|A0A072VAI1_MEDTR RING/FYVE/PHD zinc finger protein; Found in the gene: LotjaGi3g1v0158900 | 21 | ||
– | PHD finger alfin-like protein; TAIR: AT5G05610.1 alfin-like 1; Swiss-Prot: sp|A2Y0Q2|ALFL1_ORYSI PHD finger protein ALFIN-LIKE 1; TrEMBL-Plants: tr|I3SZL0|I3SZL0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0208200 | 20 | ||
– | PHD finger alfin-like protein; TAIR: AT5G05610.1 alfin-like 1; Swiss-Prot: sp|Q9FFF5|ALFL1_ARATH PHD finger protein ALFIN-LIKE 1; TrEMBL-Plants: tr|I3SZL0|I3SZL0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0208200 | 21 | ||
– | Origin recognition complex subunit 1; TAIR: AT4G14700.1 origin recognition complex 1; Swiss-Prot: sp|Q710E8|ORC1A_ARATH Origin of replication complex subunit 1A; TrEMBL-Plants: tr|I1M507|I1M507_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0287800 | 29 | ||
– | Origin recognition complex subunit 1; TAIR: AT4G14700.1 origin recognition complex 1; Swiss-Prot: sp|Q710E8|ORC1A_ARATH Origin of replication complex subunit 1A; TrEMBL-Plants: tr|I1M507|I1M507_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0287800 | 29 | ||
– | Origin recognition complex subunit 1; TAIR: AT4G14700.1 origin recognition complex 1; Swiss-Prot: sp|Q710E8|ORC1A_ARATH Origin of replication complex subunit 1A; TrEMBL-Plants: tr|I1M507|I1M507_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0287800 | 29 | ||
– | Histone acetyltransferase; TAIR: AT1G16710.10 histone acetyltransferase of the CBP family 12; Swiss-Prot: sp|Q9FWQ5|HAC12_ARATH Histone acetyltransferase HAC12; TrEMBL-Plants: tr|I1KG14|I1KG14_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0338000 | 32 | ||
– | Histone acetyltransferase; TAIR: AT1G16710.10 histone acetyltransferase of the CBP family 12; Swiss-Prot: sp|Q9FWQ5|HAC12_ARATH Histone acetyltransferase HAC12; TrEMBL-Plants: tr|I1KG14|I1KG14_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0338000 | 32 | ||
– | Histone acetyltransferase; TAIR: AT1G16710.10 histone acetyltransferase of the CBP family 12; Swiss-Prot: sp|Q9FWQ5|HAC12_ARATH Histone acetyltransferase HAC12; TrEMBL-Plants: tr|I1KG14|I1KG14_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0338000 | 32 | ||
– | Histone acetyltransferase; TAIR: AT1G16710.4 histone acetyltransferase of the CBP family 12; Swiss-Prot: sp|Q9C5X9|HAC1_ARATH Histone acetyltransferase HAC1; TrEMBL-Plants: tr|K7KYS1|K7KYS1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0338000 | 32 | ||
– | Histone acetyltransferase; TAIR: AT1G16710.10 histone acetyltransferase of the CBP family 12; Swiss-Prot: sp|Q9FWQ5|HAC12_ARATH Histone acetyltransferase HAC12; TrEMBL-Plants: tr|I1KG14|I1KG14_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0338000 | 32 | ||
– | Histone-lysine N-methyltransferase; TAIR: AT3G61740.2 SET domain protein 14; Swiss-Prot: sp|Q9M364|ATX3_ARATH Histone-lysine N-methyltransferase ATX3; TrEMBL-Plants: tr|A0A151SIL1|A0A151SIL1_CAJCA Histone-lysine N-methyltransferase; Found in the gene: LotjaGi3g1v0394900 | 38 | ||
– | PHD finger alfin-like protein; TAIR: AT5G20510.1 alfin-like 5; Swiss-Prot: sp|Q5XEM9|ALFL5_ARATH PHD finger protein ALFIN-LIKE 5; TrEMBL-Plants: tr|I1MJY1|I1MJY1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0417800 | 20 | ||
– | PHD finger alfin-like protein; TAIR: AT5G20510.1 alfin-like 5; Swiss-Prot: sp|Q5XEM9|ALFL5_ARATH PHD finger protein ALFIN-LIKE 5; TrEMBL-Plants: tr|A0A151T9G0|A0A151T9G0_CAJCA PHD finger protein family; Found in the gene: LotjaGi3g1v0417800 | 20 | ||
– | Nucleosome-remodeling factor subunit BPTF; TAIR: AT5G22760.1 PHD finger family protein; Swiss-Prot: sp|F4JYC8|PTM_ARATH DDT domain-containing protein PTM; TrEMBL-Plants: tr|A0A1J7GFU1|A0A1J7GFU1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0481400 | 22 | ||
– | Nucleosome-remodeling factor subunit; TAIR: AT5G12400.1 PHD-finger and DNA binding domain-containing protein; Swiss-Prot: sp|F4JYC8|PTM_ARATH DDT domain-containing protein PTM; TrEMBL-Plants: tr|A0A0B2PNJ8|A0A0B2PNJ8_GLYSO Nucleosome-remodeling factor subunit NURF301; Found in the gene: LotjaGi3g1v0534700 | 19 | ||
– | Nucleosome-remodeling factor subunit; TAIR: AT5G12400.1 PHD-finger and DNA binding domain-containing protein; Swiss-Prot: sp|F4JYC8|PTM_ARATH DDT domain-containing protein PTM; TrEMBL-Plants: tr|K7LNU7|K7LNU7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0534700 | 19 | ||
– | PHD finger protein family; TAIR: AT1G33420.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|Q9C810|Y1342_ARATH PHD finger protein At1g33420; TrEMBL-Plants: tr|A0A151TNX9|A0A151TNX9_CAJCA PHD finger protein family; Found in the gene: LotjaGi3g1v0555100 | 15 | ||
– | PHD finger alfin-like protein; TAIR: AT2G02470.1 alfin-like 6; Swiss-Prot: sp|Q40359|ALFIN_MEDSA PHD finger protein Alfin1; TrEMBL-Plants: tr|K7L425|K7L425_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0002700 | 20 | ||
– | Chromodomain-helicase-DNA-binding family protein; TAIR: AT5G44800.1 chromatin remodeling 4; Swiss-Prot: sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4; TrEMBL-Plants: tr|K7KPZ4|K7KPZ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0022000 | 46 | ||
– | RING/FYVE/PHD zinc finger protein, putative; TAIR: AT1G05380.1 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; Swiss-Prot: sp|F4IXE7|IDM1_ARATH Increased DNA methylation 1; TrEMBL-Plants: tr|V7B190|V7B190_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0198800_LC | 23 | ||
– | RING/FYVE/PHD zinc finger protein, putative; TAIR: AT4G14920.1 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; Swiss-Prot: sp|F4IXE7|IDM1_ARATH Increased DNA methylation 1; TrEMBL-Plants: tr|V7B190|V7B190_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0198800_LC | 17 | ||
– | RING/U-box protein; TAIR: AT3G05670.1 RING/U-box protein; Swiss-Prot: sp|Q63625|PHRF1_RAT PHD and RING finger domain-containing protein 1; TrEMBL-Plants: tr|A0A072UQF4|A0A072UQF4_MEDTR PHD-finger protein, putative; Found in the gene: LotjaGi4g1v0257700 | 19 | ||
– | Pathogenesis-related homeodomain protein; TAIR: AT4G29940.1 pathogenesis related homeodomain protein A; Swiss-Prot: sp|P48785|PRH_ARATH Pathogenesis-related homeodomain protein; TrEMBL-Plants: tr|A0A151SRV5|A0A151SRV5_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0305500 | 24 | ||
– | PHD finger alfin-like protein; TAIR: AT5G20510.1 alfin-like 5; Swiss-Prot: sp|Q5XEM9|ALFL5_ARATH PHD finger protein ALFIN-LIKE 5; TrEMBL-Plants: tr|I3SD19|I3SD19_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0327700 | 21 | ||
– | RING/U-box protein; TAIR: AT4G10930.1 RING/U-box protein; Swiss-Prot: sp|Q8L7I1|Y4193_ARATH Uncharacterized protein At4g10930; TrEMBL-Plants: tr|K7L4K2|K7L4K2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0436600 | 20 | ||
– | PHD finger alfin-like protein; TAIR: AT5G20510.1 alfin-like 5; Swiss-Prot: sp|Q5XEM9|ALFL5_ARATH PHD finger protein ALFIN-LIKE 5; TrEMBL-Plants: tr|B9IKC9|B9IKC9_POPTR PHD finger family protein; Found in the gene: LotjaGi5g1v0047100 | 20 | ||
– | PHD finger alfin-like protein; TAIR: AT5G20510.1 alfin-like 5; Swiss-Prot: sp|Q5XEM9|ALFL5_ARATH PHD finger protein ALFIN-LIKE 5; TrEMBL-Plants: tr|B9IKC9|B9IKC9_POPTR PHD finger family protein; Found in the gene: LotjaGi5g1v0047100 | 20 | ||
– | PHD finger alfin-like protein; TAIR: AT3G42790.1 alfin-like 3; Swiss-Prot: sp|Q9M2B4|ALFL3_ARATH PHD finger protein ALFIN-LIKE 3; TrEMBL-Plants: tr|D7TCI6|D7TCI6_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0047100 | 20 | ||
– | PHD finger protein family; TAIR: AT1G33420.1 RING/FYVE/PHD zinc finger superfamily protein; Swiss-Prot: sp|Q9C810|Y1342_ARATH PHD finger protein At1g33420; TrEMBL-Plants: tr|V7BEA4|V7BEA4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0196300 | 13 | ||
– | Ring PHD family protein; TAIR: AT3G05670.1 RING/U-box protein; Swiss-Prot: sp|Q9P1Y6|PHRF1_HUMAN PHD and RING finger domain-containing protein 1; TrEMBL-Plants: tr|A0A1J7GZV4|A0A1J7GZV4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0228100_LC | 21 | ||
– | Ring PHD family protein; TAIR: AT3G05670.1 RING/U-box protein; Swiss-Prot: sp|Q9P1Y6|PHRF1_HUMAN PHD and RING finger domain-containing protein 1; TrEMBL-Plants: tr|A0A1J7GZV4|A0A1J7GZV4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0228100_LC | 20 | ||
– | BRCT domain-containing protein family; TAIR: AT4G02110.2 transcription coactivator; Swiss-Prot: sp|O04251|Y4211_ARATH BRCT domain-containing protein At4g02110; TrEMBL-Plants: tr|A0A072VP53|A0A072VP53_MEDTR DNA replication regulator dpb11, putative; Found in the gene: LotjaGi5g1v0246200 | 23 | ||
– | BRCT domain-containing protein family; TAIR: AT4G02110.2 transcription coactivator; Swiss-Prot: sp|O04251|Y4211_ARATH BRCT domain-containing protein At4g02110; TrEMBL-Plants: tr|A0A072VP53|A0A072VP53_MEDTR DNA replication regulator dpb11, putative; Found in the gene: LotjaGi5g1v0246200 | 24 | ||
– | BAH-PHD domain-containing protein; TAIR: AT4G22140.2 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein; Swiss-Prot: sp|F4JL28|EBS_ARATH Chromatin remodeling protein EBS; TrEMBL-Plants: tr|A0A1J7FWH1|A0A1J7FWH1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0307200 | 19 | ||
– | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein, putative; TAIR: AT4G14920.1 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein; Swiss-Prot: sp|F4IXE7|IDM1_ARATH Increased DNA methylation 1; TrEMBL-Plants: tr|A0A072VQ30|A0A072VQ30_MEDTR RING/FYVE/PHD zinc finger protein, putative; Found in the gene: LotjaGi5g1v0313800 | 17 | ||
– | Homeobox protein; TAIR: AT3G19510.1 Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain-containing protein; Swiss-Prot: sp|Q8H991|HAZ1_ORYSJ Homeobox protein HAZ1; TrEMBL-Plants: tr|A0A1J7G9R1|A0A1J7G9R1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0325600 | 23 | ||
– | Homeobox protein; TAIR: AT3G19510.1 Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain-containing protein; Swiss-Prot: sp|Q8H991|HAZ1_ORYSJ Homeobox protein HAZ1; TrEMBL-Plants: tr|A0A1J7G9R1|A0A1J7G9R1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0325600 | 23 | ||
– | RING/FYVE/PHD zinc finger protein; TAIR: AT5G58610.3 PHD finger transcription factor; Swiss-Prot: sp|F4IXE7|IDM1_ARATH Increased DNA methylation 1; TrEMBL-Plants: tr|A0A1J7H9H6|A0A1J7H9H6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0122700_LC | 27 | ||
– | RING/FYVE/PHD zinc finger protein; TAIR: AT5G58610.4 PHD finger transcription factor; Swiss-Prot: sp|F4IXE7|IDM1_ARATH Increased DNA methylation 1; TrEMBL-Plants: tr|A0A1J7H9H6|A0A1J7H9H6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0122700_LC | 27 | ||
– | RING/FYVE/PHD zinc finger protein; TAIR: AT5G58610.4 PHD finger transcription factor; Swiss-Prot: sp|F4IXE7|IDM1_ARATH Increased DNA methylation 1; TrEMBL-Plants: tr|A0A1J7H9H6|A0A1J7H9H6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0122700_LC | 28 | ||
– | PHD finger alfin-like protein; TAIR: AT3G42790.1 alfin-like 3; Swiss-Prot: sp|Q7XUW3|ALFL4_ORYSJ PHD finger protein ALFIN-LIKE 4; TrEMBL-Plants: tr|A0A1J7I2R7|A0A1J7I2R7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0227400 | 21 | ||
– | Pathogenesis-related homeodomain protein; TAIR: AT4G29940.1 pathogenesis related homeodomain protein A; Swiss-Prot: sp|P48785|PRH_ARATH Pathogenesis-related homeodomain protein; TrEMBL-Plants: tr|K7MBU2|K7MBU2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0235500 | 25 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
mobidb-lite | MobiDBLite | 1 | 0.67 |