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GO:0000213

View this GO term in other databases

Overview

Field Value
Namespace Molecular function
Short description TRNA-intron endonuclease activity
Full defintion Catalysis of the endonucleolytic cleavage of pre-tRNA, producing 5'-hydroxyl and 2',3'-cyclic phosphate termini, and specifically removing the intron.
Subterm of

Relationships

The relationship of GO:0000213 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

A force layout showing the ancestor tree for GO:0000213, and its immediate children. If you wish to explore the tree dynamically, please use the GO Explorer.

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Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
EC3.1.27.9

Associated Lotus transcripts 4

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
Lj1g3v3948040.1
– PREDICTED: tRNA-splicing endonuclease subunit Sen2-1-like [Cicer arietinum] gi|502109005|ref|XP_004493544.1|
GO terms
2
Lj1g3v4290130.1
– PREDICTED: tRNA-splicing endonuclease subunit Sen2-1-like [Cicer arietinum] gi|502109005|ref|XP_004493544.1|
GO terms
2
LotjaGi1g1v0639100.1
– TRNA-splicing endonuclease subunit Sen2; TAIR: AT3G45590.1 splicing endonuclease 1; Swiss-Prot: sp|Q9M1E8|SEN21_ARATH tRNA-splicing endonuclease subunit Sen2-1; TrEMBL-Plants: tr|V7CYA6|V7CYA6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0639100
GO terms
2
LotjaGi1g1v0723100_LC.1
– TRNA-splicing endonuclease subunit Sen2; TAIR: AT3G45590.1 splicing endonuclease 1; Swiss-Prot: sp|Q9M1E8|SEN21_ARATH tRNA-splicing endonuclease subunit Sen2-1; TrEMBL-Plants: tr|V7CYA6|V7CYA6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0723100_LC
GO terms
2

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0006388
Biological process TRNA splicing, via endonucleolytic cleavage and ligation 1 25.00