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GO:0000380

View this GO term in other databases

Overview

Field Value
Namespace Biological process
Short description Alternative mRNA splicing, via spliceosome
Full defintion The process of generating multiple mRNA molecules from a given set of exons by differential use of exons from the primary transcript(s) to form multiple mature mRNAs that vary in their exon composition.
Subterm of

Relationships

The relationship of GO:0000380 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

A force layout showing the ancestor tree for GO:0000380, and its immediate children. If you wish to explore the tree dynamically, please use the GO Explorer.

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Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOCkrc
PMID
Alternative pre-mRNA splicing and proteome expansion in metazoans.Maniatis T, Tasic B
Nature. 2002 Jul 11; 418 (6894): 236–43.PMID: 12110900

The protein coding sequences of most eukaryotic messenger RNA precursors (pre-mRNAs) are interrupted by non-coding sequences called introns. Pre-mRNA splicing is the process by which introns are removed and the protein coding elements assembled into mature mRNAs. Alternative pre-mRNA splicing selectively joins different protein coding elements to form mRNAs that encode proteins with distinct functions, and is therefore an important source of protein diversity. The elaboration of this mechanism may have had a significant role in the expansion of metazoan proteomes during evolution.

Associated Lotus transcripts 1

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
LotjaGi4g1v0236700_LC.1
– Arginine/serine-rich coiled coil protein; TAIR: AT3G48120.1 serine/arginine-rich splicing factor; Swiss-Prot: sp|Q9AS36|CCL11_ORYSJ Cyclin-L1-1; TrEMBL-Plants: tr|A0A1J7HF63|A0A1J7HF63_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0236700_LC
GO terms
2

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0000398
Biological process MRNA splicing, via spliceosome 1 100.00