Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

GO:0006306

View this GO term in other databases

Overview

Field Value
Namespace Biological process
Short description DNA methylation
Full defintion The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine.
Subterm of

Relationships

The relationship of GO:0006306 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

A force layout showing the ancestor tree for GO:0006306, and its immediate children. If you wish to explore the tree dynamically, please use the GO Explorer.

  • Drag and drop nodes to manually position (i.e. fix) them
  • Double click on a node to unfix the node
  • Press Alt and double click to visit the page containing further details of a GO term
  • Right clicking on a node will reveal a context menu

Controls

Force layout

Every force layout is different—we have picked a set of parameters which suits most GO ancestor tree chart well. If you mess something up—don't worry: hitting the "reset view" button above will reset the chart to its default layout.

Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOCems
ISBN

· ISBN: 0198506732

, · pages

Associated Lotus transcripts 10

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
Lj0g3v0004549.1
– PREDICTED: DNA (cytosine-5)-methyltransferase DRM2-like [Glycine max] gi|356511676|ref|XP_003524549.1|
GO terms
1
Lj0g3v0004569.1
– PREDICTED: DNA (cytosine-5)-methyltransferase DRM2-like, partial [Solanum lycopersicum] gi|460415896|ref|XP_004253289.1|
GO terms
1
Lj2g3v1451840.1
– PREDICTED: DNA (cytosine-5)-methyltransferase DRM2-like [Glycine max] gi|356511676|ref|XP_003524549.1|
GO terms
1
Lj4g3v2250350.2
– PREDICTED: DNA (cytosine-5)-methyltransferase DRM1-like isoform X1 [Cicer arietinum] gi|502150738|ref|XP_004508099.1|
GO terms
1
Lj4g3v2250360.1
– PREDICTED: DNA (cytosine-5)-methyltransferase DRM1-like [Glycine max] gi|356519874|ref|XP_003528594.1|
GO terms
1
LotjaGi2g1v0244100.1
– DNA (Cytosine-5-)-methyltransferase; TAIR: AT5G14620.1 domains rearranged methyltransferase 2; Swiss-Prot: sp|Q9M548|DRM2_ARATH DNA (cytosine-5)-methyltransferase DRM2; TrEMBL-Plants: tr|I1K1I2|I1K1I2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0244100
GO terms
1
LotjaGi2g1v0244100.2
– DNA (Cytosine-5-)-methyltransferase; TAIR: AT5G14620.1 domains rearranged methyltransferase 2; Swiss-Prot: sp|Q9M548|DRM2_ARATH DNA (cytosine-5)-methyltransferase DRM2; TrEMBL-Plants: tr|I1K1I2|I1K1I2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0244100
GO terms
1
LotjaGi2g1v0321400_LC.1
– DNA (Cytosine-5-)-methyltransferase; TAIR: AT5G14620.1 domains rearranged methyltransferase 2; Swiss-Prot: sp|Q9M548|DRM2_ARATH DNA (cytosine-5)-methyltransferase DRM2; TrEMBL-Plants: tr|K7K692|K7K692_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0321400_LC
GO terms
1
LotjaGi3g1v0172800.1
– DNA (Cytosine-5-)-methyltransferase; TAIR: AT5G14620.1 domains rearranged methyltransferase 2; Swiss-Prot: sp|Q9M548|DRM2_ARATH DNA (cytosine-5)-methyltransferase DRM2; TrEMBL-Plants: tr|I1K1I2|I1K1I2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0172800
GO terms
1
LotjaGi4g1v0335100.1
– DNA (Cytosine-5-)-methyltransferase; TAIR: AT3G17310.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q8H1E8|DRM3_ARATH Probable inactive DNA (cytosine-5)-methyltransferase DRM3; TrEMBL-Plants: tr|K7MJU2|K7MJU2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0335100
GO terms
1

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0006306
Biological process DNA methylation 1 10.00