Gene Ontology — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

GO:0006493

Overview

Field	Value
Namespace	Biological process
Short description	Protein O-linked glycosylation
Full defintion	A protein glycosylation process in which a carbohydrate or carbohydrate derivative unit is added to a protein via the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or via the phenol group of peptidyl-tyrosine, forming an O-glycan.
Subterm of	GO:0006486

Relationships

The relationship of GO:0006493 with other GO terms.

Relationship type	GO terms
Is a	GO:0006486
Regulates	n.a.
Part of	n.a.
Positively regulates	n.a.
Negatively regulates	n.a.

Ancestor tree

A force layout showing the ancestor tree for GO:0006493, and its immediate children. If you wish to explore the tree dynamically, please use the GO Explorer.

Drag and drop nodes to manually position (i.e. fix) them
Double click on a node to unfix the node
Press Alt and double click to visit the page containing further details of a GO term
Right clicking on a node will reveal a context menu

Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field	Value
RESID	AA0212
GOC	pr
ISBN	Essentials of Glycobiology Ajit Varki · ISBN: 0879695595 , 1999 · 680 pages Sugar chains (glycans) are often attached to proteins and lipids and have multiple roles in the organization and function of all organisms. "Essentials of Glycobiology" describes their biogenesis and function and offers a useful gateway to the understanding of glycans.

Associated Lotus transcripts 5

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

Transcript	Name	Description	GO terms	GO count
LotjaGi5g1v0205100.1 View transcript LORE1 insertions in MG20 v3.0 Genome browser Expression Atlas (ExpAt)	–	Tetratricopeptide repeat (TPR)-like superfamily protein; TAIR: AT3G04240.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp\|Q9M8Y0\|SEC_ARATH Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; TrEMBL-Plants: tr\|G7I5N5\|G7I5N5_MEDTR Peptide-N-acetylglucosaminyltransferase; Found in the gene: LotjaGi5g1v0205100	GO terms View details of GO:0006493 View details of GO:0016757	2
LotjaGi5g1v0205100.2 View transcript LORE1 insertions in MG20 v3.0 Genome browser Expression Atlas (ExpAt)	–	Tetratricopeptide repeat (TPR)-containing protein; TAIR: AT3G04240.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp\|Q9M8Y0\|SEC_ARATH Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; TrEMBL-Plants: tr\|G7I5N5\|G7I5N5_MEDTR Peptide-N-acetylglucosaminyltransferase; Found in the gene: LotjaGi5g1v0205100	GO terms View details of GO:0006493 View details of GO:0016757	2
LotjaGi5g1v0205100.3 View transcript LORE1 insertions in MG20 v3.0 Genome browser Expression Atlas (ExpAt)	–	Tetratricopeptide repeat (TPR)-like superfamily protein; TAIR: AT3G04240.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp\|Q9M8Y0\|SEC_ARATH Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; TrEMBL-Plants: tr\|G7I5N5\|G7I5N5_MEDTR Peptide-N-acetylglucosaminyltransferase; Found in the gene: LotjaGi5g1v0205100	GO terms View details of GO:0006493 View details of GO:0016757	2
LotjaGi5g1v0205100.4 View transcript LORE1 insertions in MG20 v3.0 Genome browser Expression Atlas (ExpAt)	–	Tetratricopeptide repeat (TPR)-like superfamily protein; TAIR: AT3G04240.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp\|Q9M8Y0\|SEC_ARATH Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; TrEMBL-Plants: tr\|G7I5N5\|G7I5N5_MEDTR Peptide-N-acetylglucosaminyltransferase; Found in the gene: LotjaGi5g1v0205100	GO terms View details of GO:0006493 View details of GO:0016757	2
LotjaGi5g1v0205100.5 View transcript LORE1 insertions in MG20 v3.0 Genome browser Expression Atlas (ExpAt)	–	Tetratricopeptide repeat (TPR)-like superfamily protein; TAIR: AT3G04240.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp\|Q9M8Y0\|SEC_ARATH Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; TrEMBL-Plants: tr\|G7I5N5\|G7I5N5_MEDTR Peptide-N-acetylglucosaminyltransferase; Found in the gene: LotjaGi5g1v0205100	GO terms View details of GO:0006493 View details of GO:0016757	2

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term	Namespace	Name	Observations	Saturation (%)
GO:0016757 View details of GO:0016757 AmiGO InterPro QuickGO	Molecular function	Transferase activity, transferring glycosyl groups	1	20.00