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GO:0010239

View this GO term in other databases

Overview

Field Value
Namespace Biological process
Short description Chloroplast mRNA processing
Full defintion Steps involved in processing precursor RNAs arising from transcription of operons in the chloroplast genome into mature mRNAs.
Subterm of

Relationships

The relationship of GO:0010239 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

A force layout showing the ancestor tree for GO:0010239, and its immediate children. If you wish to explore the tree dynamically, please use the GO Explorer.

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Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOCtb
PMID
The PAC protein affects the maturation of specific chloroplast mRNAs in Arabidopsis thaliana.Meurer J, Grevelding C, Westhoff P, Reiss B
Mol Gen Genet. 1998 May; 258 (4): 342–51.PMID: 9648738

The pale cress (pac) mutation arrests chloroplast development at an early stage in Arabidopsis thaliana and leads to a white phenotype. Chlorophyll fluorescence measurements demonstrated that the photosynthetic apparatus was impaired. The mutation did not reduce transcription of nuclear genes with photosynthetic function. However, distinct chloroplast-encoded transcripts were affected. The mutation mainly changed the maturation pattern, but the abundance of specific transcripts was also reduced. The defects observed imply a specific role for PAC in chloroplast mRNA maturation. PAC is encoded by a nuclear gene and is transported into the chloroplast. Therefore PAC may be one of the nucleus-encoded factors that function in plastid mRNA maturation and accumulation.

Associated Lotus transcripts 1

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
LotjaGi5g1v0163600.1
– PALE CRESS protein (PAC); TAIR: AT2G48120.1 pale cress protein (PAC); Swiss-Prot: sp|Q39089|PAC_ARATH Protein PALE CRESS, chloroplastic; TrEMBL-Plants: tr|I1L816|I1L816_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0163600
GO terms
4

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0048366
Biological process Leaf development 1 100.00