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Field | Value |
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Namespace | Cellular component |
Short description | Zeta DNA polymerase complex |
Full defintion | A heterodimeric DNA polymerase complex that catalyzes error-prone DNA synthesis in contexts such as translesion synthesis and double-stranded break repair. First characterized in Saccharomyces, in which the subunits are Rev3p and Rev7p; a third protein, Rev1p, is often associated with the polymerase dimer. |
Subterm of |
The relationship of GO:0016035 with other GO terms.
Relationship type | GO terms |
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Is a | |
Regulates | n.a. |
Part of | n.a. |
Positively regulates | n.a. |
Negatively regulates | n.a. |
A force layout showing the ancestor tree for GO:0016035, and its immediate children. If you wish to explore the tree dynamically, please use the GO Explorer.
This table contains additional metadata associated with the GO entry's definition field.
Field | Value |
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PMID | The fidelity of DNA synthesis by yeast DNA polymerase zeta alone and with accessory proteins. Nucleic Acids Res. 2006; 34 (17): 4731–42.PMID: 16971464 DNA polymerase zeta (pol zeta) participates in several DNA transactions in eukaryotic cells that increase spontaneous and damage-induced mutagenesis. To better understand this central role in mutagenesis in vivo, here we report the fidelity of DNA synthesis in vitro by yeast pol zeta alone and with RFC, PCNA and RPA. Overall, the accessory proteins have little effect on the fidelity of pol zeta. Pol zeta is relatively accurate for single base insertion/deletion errors. However, the average base substitution fidelity of pol zeta is substantially lower than that of homologous B family pols alpha, delta and epsilon. Pol zeta is particularly error prone for substitutions in specific sequence contexts and generates multiple single base errors clustered in short patches at a rate that is unprecedented in comparison with other polymerases. The unique error specificity of pol zeta in vitro is consistent with Pol zeta-dependent mutagenic specificity reported in vivo. This fact, combined with the high rate of single base substitution errors and complex mutations observed here, indicates that pol zeta contributes to mutagenesis in vivo not only by extending mismatches made by other polymerases, but also by directly generating its own mismatches and then extending them. |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Transcript | Name | Description | GO terms | GO count |
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– | PREDICTED: DNA polymerase zeta catalytic subunit-like [Cicer arietinum] gi|502114426|ref|XP_004494955.1| | 3 | ||
– | DNA polymerase; TAIR: AT1G67500.1 recovery protein 3; Swiss-Prot: sp|Q766Z3|REV3_ARATH DNA polymerase zeta catalytic subunit; TrEMBL-Plants: tr|I1JRC1|I1JRC1_SOYBN DNA polymerase; Found in the gene: LotjaGi1g1v0772700 | 3 | ||
– | DNA polymerase; TAIR: AT1G67500.1 recovery protein 3; Swiss-Prot: sp|Q766Z3|REV3_ARATH DNA polymerase zeta catalytic subunit; TrEMBL-Plants: tr|I1JRC1|I1JRC1_SOYBN DNA polymerase; Found in the gene: LotjaGi1g1v0772700 | 3 |
A list of co-occurring GO terms within the L. japonicus gene space:
GO term | Namespace | Name | Observations | Saturation (%) |
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Biological process | Translesion synthesis | 1 | 33.33 |