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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0011459 |
| Transcript ID | Lj0g3v0011459.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: nodulin-26-like [Glycine max] gi|356551693|ref|XP_003544208.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 1 | 132 | 132 | 1.44E-34 | ||
| Gene3D | 1 | 135 | 135 | 7.30E-38 | ||
| PANTHER | 1 | 140 | 140 | 7.40E-79 | ||
| Pfam | 1 | 124 | 124 | 1.50E-31 | ||
| PANTHER | 1 | 140 | 140 | 7.40E-79 | – | |
| Phobius | 1 | 35 | 35 | – | – | |
| TMHMM | 36 | 55 | 20 | – | – | |
| Phobius | 36 | 55 | 20 | – | – | |
| PRINTS | 39 | 57 | 19 | 1.00E-19 | ||
| Phobius | 56 | 66 | 11 | – | – | |
| TMHMM | 64 | 86 | 23 | – | – | |
| Phobius | 67 | 86 | 20 | – | – | |
| PRINTS | 70 | 92 | 23 | 1.00E-19 | ||
| Phobius | 87 | 105 | 19 | – | – | |
| TMHMM | 106 | 128 | 23 | – | – | |
| Phobius | 106 | 127 | 22 | – | – | |
| PRINTS | 107 | 127 | 21 | 1.00E-19 | ||
| Phobius | 128 | 148 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Channel activity | Enables the energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0011459.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0011459.1, powered by CORGI.
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