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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0038979 |
| Transcript ID | Lj0g3v0038979.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | MLO1 [Medicago truncatula] gi|318101907|gb|ADV40949.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 17 | 17 | – | – | |
| PANTHER | 4 | 570 | 567 | 0 | – | |
| PANTHER | 4 | 570 | 567 | 0 | – | |
| Pfam | 9 | 495 | 487 | 2.50E-239 | ||
| Phobius | 18 | 38 | 21 | – | – | |
| TMHMM | 20 | 42 | 23 | – | – | |
| Phobius | 39 | 58 | 20 | – | – | |
| Phobius | 59 | 77 | 19 | – | – | |
| Phobius | 78 | 156 | 79 | – | – | |
| TMHMM | 157 | 179 | 23 | – | – | |
| Phobius | 157 | 178 | 22 | – | – | |
| Phobius | 179 | 281 | 103 | – | – | |
| Phobius | 282 | 301 | 20 | – | – | |
| TMHMM | 284 | 306 | 23 | – | – | |
| Phobius | 302 | 306 | 5 | – | – | |
| Phobius | 307 | 325 | 19 | – | – | |
| TMHMM | 310 | 332 | 23 | – | – | |
| Phobius | 326 | 365 | 40 | – | – | |
| TMHMM | 366 | 385 | 20 | – | – | |
| Phobius | 366 | 385 | 20 | – | – | |
| Phobius | 386 | 404 | 19 | – | – | |
| Phobius | 405 | 430 | 26 | – | – | |
| TMHMM | 405 | 427 | 23 | – | – | |
| Phobius | 431 | 575 | 145 | – | – | |
| MobiDBLite | 458 | 486 | 29 | – | – | |
| MobiDBLite | 499 | 531 | 33 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Defense response | Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj0g3v0038979.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0038979.1, powered by CORGI.
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