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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0041649 |
| Transcript ID | Lj0g3v0041649.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: WD repeat-containing protein 76-like [Glycine max] gi|356548457|ref|XP_003542618.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 468 | 468 | 1.40E-155 | – | |
| PANTHER | 1 | 468 | 468 | 1.40E-155 | ||
| MobiDBLite | 134 | 161 | 28 | – | – | |
| SMART | 170 | 211 | 42 | 110 | ||
| Gene3D | 171 | 449 | 279 | 3.60E-33 | ||
| SUPERFAMILY | 178 | 450 | 273 | 4.89E-33 | ||
| SMART | 213 | 253 | 41 | 2.3 | ||
| ProSiteProfiles | 220 | 394 | 175 | 15.716 | ||
| SMART | 256 | 296 | 41 | 220 | ||
| SMART | 299 | 339 | 41 | 1.00E-05 | ||
| ProSiteProfiles | 306 | 341 | 36 | 8.771 | ||
| ProSitePatterns | 326 | 340 | 15 | – | ||
| SMART | 347 | 385 | 39 | 0.0095 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Cellular response to DNA damage stimulus | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism. |
Expression pattern of Lj0g3v0041649.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0041649.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.