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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0057909 |
| Transcript ID | Lj0g3v0057909.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: auxin-induced protein 5NG4-like [Glycine max] gi|356509972|ref|XP_003523716.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 215 | 215 | 2.60E-153 | ||
| PANTHER | 1 | 215 | 215 | 2.60E-153 | – | |
| Phobius | 1 | 20 | 20 | – | – | |
| TMHMM | 21 | 43 | 23 | – | – | |
| Phobius | 21 | 37 | 17 | – | – | |
| Phobius | 38 | 78 | 41 | – | – | |
| TMHMM | 78 | 100 | 23 | – | – | |
| Phobius | 79 | 99 | 21 | – | – | |
| Pfam | 81 | 215 | 135 | 1.10E-14 | ||
| Phobius | 100 | 110 | 11 | – | – | |
| Phobius | 111 | 132 | 22 | – | – | |
| TMHMM | 113 | 132 | 20 | – | – | |
| SUPERFAMILY | 125 | 215 | 91 | 1.57E-07 | – | |
| Phobius | 133 | 146 | 14 | – | – | |
| TMHMM | 147 | 169 | 23 | – | – | |
| Phobius | 147 | 168 | 22 | – | – | |
| Phobius | 169 | 174 | 6 | – | – | |
| Phobius | 175 | 196 | 22 | – | – | |
| TMHMM | 190 | 212 | 23 | – | – | |
| Phobius | 197 | 215 | 19 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0057909.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0057909.1, powered by CORGI.
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