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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0064329 |
| Transcript ID | Lj0g3v0064329.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: WAT1-related protein At4g30420-like [Cicer arietinum] gi|502150096|ref|XP_004507786.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 342 | 342 | 3.00E-196 | ||
| Phobius | 1 | 11 | 11 | – | – | |
| PANTHER | 1 | 342 | 342 | 3.00E-196 | – | |
| TMHMM | 5 | 27 | 23 | – | – | |
| Pfam | 9 | 151 | 143 | 6.10E-13 | ||
| Phobius | 12 | 32 | 21 | – | – | |
| Phobius | 33 | 37 | 5 | – | – | |
| Phobius | 38 | 58 | 21 | – | – | |
| TMHMM | 42 | 59 | 18 | – | – | |
| SUPERFAMILY | 44 | 155 | 112 | 1.44E-07 | – | |
| Phobius | 59 | 69 | 11 | – | – | |
| Phobius | 70 | 90 | 21 | – | – | |
| TMHMM | 72 | 94 | 23 | – | – | |
| Phobius | 91 | 95 | 5 | – | – | |
| Phobius | 96 | 123 | 28 | – | – | |
| TMHMM | 104 | 126 | 23 | – | – | |
| Phobius | 124 | 134 | 11 | – | – | |
| TMHMM | 133 | 155 | 23 | – | – | |
| Phobius | 135 | 155 | 21 | – | – | |
| Phobius | 156 | 178 | 23 | – | – | |
| TMHMM | 179 | 198 | 20 | – | – | |
| Phobius | 179 | 199 | 21 | – | – | |
| Pfam | 181 | 318 | 138 | 2.50E-10 | ||
| Phobius | 200 | 210 | 11 | – | – | |
| TMHMM | 211 | 233 | 23 | – | – | |
| Phobius | 211 | 233 | 23 | – | – | |
| SUPERFAMILY | 219 | 323 | 105 | 7.06E-07 | – | |
| Phobius | 234 | 244 | 11 | – | – | |
| TMHMM | 243 | 265 | 23 | – | – | |
| Phobius | 245 | 263 | 19 | – | – | |
| Phobius | 264 | 274 | 11 | – | – | |
| TMHMM | 272 | 294 | 23 | – | – | |
| Phobius | 275 | 294 | 20 | – | – | |
| Phobius | 295 | 299 | 5 | – | – | |
| TMHMM | 298 | 320 | 23 | – | – | |
| Phobius | 300 | 320 | 21 | – | – | |
| Phobius | 321 | 342 | 22 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0064329.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0064329.1, powered by CORGI.
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