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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0068819 |
| Transcript ID | Lj0g3v0068819.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: cystine/glutamate transporter-like [Glycine max] gi|356551723|ref|XP_003544223.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 23 | 23 | – | – | |
| PIRSF | 8 | 463 | 456 | 8.20E-60 | ||
| PANTHER | 12 | 459 | 448 | 0 | ||
| PANTHER | 12 | 459 | 448 | 0 | – | |
| TMHMM | 24 | 43 | 20 | – | – | |
| Phobius | 24 | 43 | 20 | – | – | |
| Phobius | 44 | 49 | 6 | – | – | |
| Pfam | 47 | 423 | 377 | 2.90E-33 | ||
| Phobius | 50 | 69 | 20 | – | – | |
| TMHMM | 50 | 69 | 20 | – | – | |
| Phobius | 70 | 108 | 39 | – | – | |
| TMHMM | 102 | 124 | 23 | – | – | |
| Phobius | 109 | 127 | 19 | – | – | |
| Phobius | 128 | 138 | 11 | – | – | |
| TMHMM | 137 | 159 | 23 | – | – | |
| Phobius | 139 | 156 | 18 | – | – | |
| Phobius | 157 | 161 | 5 | – | – | |
| Phobius | 162 | 185 | 24 | – | – | |
| TMHMM | 163 | 185 | 23 | – | – | |
| Phobius | 186 | 239 | 54 | – | – | |
| TMHMM | 205 | 227 | 23 | – | – | |
| Phobius | 240 | 264 | 25 | – | – | |
| TMHMM | 242 | 264 | 23 | – | – | |
| Phobius | 265 | 291 | 27 | – | – | |
| Phobius | 292 | 314 | 23 | – | – | |
| Phobius | 315 | 334 | 20 | – | – | |
| TMHMM | 333 | 355 | 23 | – | – | |
| Phobius | 335 | 352 | 18 | – | – | |
| Phobius | 353 | 363 | 11 | – | – | |
| Phobius | 364 | 382 | 19 | – | – | |
| TMHMM | 365 | 382 | 18 | – | – | |
| Phobius | 383 | 393 | 11 | – | – | |
| Phobius | 394 | 416 | 23 | – | – | |
| TMHMM | 395 | 417 | 23 | – | – | |
| Phobius | 417 | 421 | 5 | – | – | |
| TMHMM | 421 | 440 | 20 | – | – | |
| Phobius | 422 | 440 | 19 | – | – | |
| Phobius | 441 | 467 | 27 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0068819.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0068819.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.