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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0075799 |
| Transcript ID | Lj0g3v0075799.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | RING-H2 finger protein ATL5F [Medicago truncatula] gi|357517389|ref|XP_003628983.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 171 | 171 | 2.40E-48 | – | |
| PANTHER | 1 | 272 | 272 | 1.80E-171 | – | |
| SUPERFAMILY | 1 | 140 | 140 | 3.42E-27 | – | |
| PANTHER | 1 | 272 | 272 | 1.80E-171 | – | |
| Pfam | 2 | 139 | 138 | 2.00E-20 | – | |
| PRINTS | 19 | 33 | 15 | 1.10E-10 | ||
| PRINTS | 37 | 56 | 20 | 1.10E-10 | ||
| PRINTS | 123 | 142 | 20 | 1.10E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Polyamine transport | The directed movement of polyamines, organic compounds containing two or more amino groups, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Polyamine binding | Interacting selectively and non-covalently with polyamines, organic compounds containing two or more amino groups. | ||
| Cellular component | Periplasmic space | The region between the inner (cytoplasmic) and outer membrane (Gram-negative Bacteria) or cytoplasmic membrane and cell wall (Fungi and Gram-positive Bacteria). |
Expression pattern of Lj0g3v0075799.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0075799.2, powered by CORGI.
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