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Lj0g3v0084469.1

Overview

Field Value
Gene ID Lj0g3v0084469
Transcript ID Lj0g3v0084469.1
Lotus japonicus genome version MG20 v3.0
Description Adenylosuccinate synthase [Theobroma cacao] gi|508717442|gb|EOY09339.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Hamap
MF_00011
1 312 312 84.553
IPR001114
PANTHER
PTHR11846
1 137 137 2.10E-149
IPR001114
PANTHER
PTHR11846:SF4
1 137 137 2.10E-149 –
Pfam
PF00709
4 310 307 2.50E-82
IPR001114
SMART
SM00788
5 311 307 5.10E-41
IPR001114
SUPERFAMILY
SSF52540
20 144 125 3.72E-31
IPR027417
Gene3D
G3DSA:3.40.440.10
41 122 82 3.70E-23 –
SUPERFAMILY
SSF52540
151 311 161 6.48E-44
IPR027417
Gene3D
G3DSA:3.90.170.10
153 311 159 4.50E-52 –
PANTHER
PTHR11846
167 312 146 2.10E-149
IPR001114
PANTHER
PTHR11846:SF4
167 312 146 2.10E-149 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004019
Molecular function Adenylosuccinate synthase activity Catalysis of the reaction: L-aspartate + GTP + IMP = N(6)-(1,2-dicarboxyethyl)-AMP + GDP + 3 H(+) + phosphate.
Subterm of
GO:0005525
Molecular function GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
Subterm of
GO:0006164
Biological process Purine nucleotide biosynthetic process The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.
Subterm of

Genome browser

LORE1 insertions 11

Expression data

Expression pattern

Expression pattern of Lj0g3v0084469.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0084469.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.