Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj0g3v0084709.1

Overview

Field Value
Gene ID Lj0g3v0084709
Transcript ID Lj0g3v0084709.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: UDP-galactose transporter 1-like [Glycine max] gi|356552668|ref|XP_003544685.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 11 11
PANTHER 8 268 261 4.60E-204
PANTHER 8 268 261 4.60E-204
TMHMM 9 31 23
Phobius 12 31 20
Pfam 15 267 253 1.20E-38
Phobius 32 42 11
TMHMM 41 63 23
Phobius 43 63 21
Phobius 64 82 19
SUPERFAMILY 70 152 83 3.14E-07
Phobius 83 104 22
TMHMM 84 106 23
Phobius 105 133 29
Phobius 134 153 20
TMHMM 136 170 35
Phobius 154 158 5
Phobius 159 182 24
Phobius 183 193 11
TMHMM 191 213 23
Phobius 194 212 19
Phobius 213 227 15
TMHMM 228 250 23
Phobius 228 252 25
Phobius 253 268 16

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Expression data

Expression pattern

Expression pattern of Lj0g3v0084709.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0084709.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.