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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0088569 |
| Transcript ID | Lj0g3v0088569.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | ACT domain repeat 3 isoform 1 [Theobroma cacao] gi|508724613|gb|EOY16510.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 367 | 366 | 1.20E-231 | – | |
| PANTHER | 2 | 367 | 366 | 1.20E-231 | – | |
| SUPERFAMILY | 32 | 107 | 76 | 2.86E-12 | – | |
| CDD | 35 | 106 | 72 | 9.70E-37 | – | |
| Gene3D | 36 | 103 | 68 | 1.20E-05 | – | |
| Pfam | 36 | 85 | 50 | 1.20E-07 | ||
| ProSiteProfiles | 37 | 114 | 78 | 9.736 | ||
| SUPERFAMILY | 125 | 201 | 77 | 1.46E-12 | – | |
| Gene3D | 127 | 205 | 79 | 1.10E-17 | – | |
| Pfam | 130 | 173 | 44 | 1.20E-08 | ||
| ProSiteProfiles | 130 | 209 | 80 | 11.733 | ||
| CDD | 268 | 342 | 75 | 3.51E-40 | – | |
| ProSiteProfiles | 348 | 367 | 20 | 8.183 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj0g3v0088569.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0088569.1, powered by CORGI.
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