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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0089459 |
| Transcript ID | Lj0g3v0089459.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha [Medicago truncatula] gi|357454431|ref|XP_003597496.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 288 | 288 | 1.10E-108 | – | |
| PANTHER | 1 | 288 | 288 | 1.10E-108 | – | |
| SUPERFAMILY | 8 | 321 | 314 | 4.05E-84 | – | |
| Gene3D | 10 | 321 | 312 | 6.60E-89 | – | |
| ProSiteProfiles | 56 | 90 | 35 | 14.683 | ||
| Pfam | 61 | 86 | 26 | 6.10E-07 | ||
| ProSiteProfiles | 91 | 125 | 35 | 17.214 | ||
| Pfam | 95 | 121 | 27 | 1.70E-10 | ||
| ProSiteProfiles | 127 | 161 | 35 | 17.09 | ||
| Pfam | 131 | 157 | 27 | 1.30E-11 | ||
| ProSiteProfiles | 162 | 195 | 34 | 14.665 | ||
| Pfam | 165 | 191 | 27 | 6.80E-07 | ||
| ProSiteProfiles | 202 | 236 | 35 | 11.293 | ||
| PANTHER | 304 | 327 | 24 | 1.10E-108 | – | |
| PANTHER | 304 | 327 | 24 | 1.10E-108 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein prenyltransferase activity | Catalysis of the covalent addition of an isoprenoid group such as a farnesyl or geranylgeranyl group via thioether linkages to a cysteine residue in a protein. | ||
| Biological process | Protein prenylation | The covalent attachment of a prenyl group to a protein; geranyl, farnesyl, or geranylgeranyl groups may be added. |
Expression pattern of Lj0g3v0089459.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0089459.1, powered by CORGI.
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