Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR002088
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 8 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.030s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0089459.1
n.a. Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha [Medicago truncatula] gi|357454431|ref|XP_003597496.1| chr0 36690899 36695312 +
3 domain predictions
2 GO terms
Lj0g3v0207119.2
n.a. PREDICTED: protein prenyltransferase alpha subunit repeat-containing protein 1-like isoform X1 [Cicer arietinum] gi|502173578|ref|XP_004515362.1| chr0 103388343 103391247 -
3 domain predictions
2 GO terms
Lj1g3v1548830.1
n.a. Geranylgeranyl transferase type-2 subunit alpha [Medicago truncatula] gi|357465223|ref|XP_003602893.1| chr1 18562135 18566823 -
3 domain predictions
2 GO terms
LotjaGi1g1v0345500.1
n.a. Geranylgeranyl transferase type-2 subunit alpha 1; TAIR: AT4G24490.1 RAB geranylgeranyl transferase alpha subunit 1; Swiss-Prot: sp|Q8VYB7|PGTA1_ARATH Geranylgeranyl transferase type-2 subunit alpha 1; TrEMBL-Plants: tr|A0A0B2PII6|A0A0B2PII6_GLYSO Geranylgeranyl transferase type-2 subunit alpha; Found in the gene: LotjaGi1g1v0345500 LjG1.1_chr1 81222934 81228311 -
3 domain predictions
2 GO terms
LotjaGi3g1v0066000.1
n.a. Protein prenyltransferase alpha subunit repeat-containing protein 1; TAIR: AT1G10095.1 Protein prenylyltransferase superfamily protein; Swiss-Prot: sp|A3KPW7|PTAR1_DANRE Protein prenyltransferase alpha subunit repeat-containing protein 1; TrEMBL-Plants: tr|A0A072TJX1|A0A072TJX1_MEDTR Protein prenyltransferase alpha subunit repeat protein; Found in the gene: LotjaGi3g1v0066000 LjG1.1_chr3 7000031 7013120 +
2 domain predictions
2 GO terms
LotjaGi3g1v0066000.2
n.a. Protein prenyltransferase, alpha subunit; TAIR: AT1G10095.1 Protein prenylyltransferase superfamily protein; Swiss-Prot: sp|A3KPW7|PTAR1_DANRE Protein prenyltransferase alpha subunit repeat-containing protein 1; TrEMBL-Plants: tr|K7L180|K7L180_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0066000 LjG1.1_chr3 7000031 7013120 +
3 domain predictions
2 GO terms
LotjaGi3g1v0294100.1
n.a. Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; TAIR: AT3G59380.1 farnesyltransferase A; Swiss-Prot: sp|O24304|FNTA_PEA Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; TrEMBL-Plants: tr|G7IHS5|G7IHS5_MEDTR Protein prenyltransferase alpha subunit repeat protein; Found in the gene: LotjaGi3g1v0294100 LjG1.1_chr3 60138931 60145874 -
3 domain predictions
2 GO terms
LotjaGi3g1v0294100.2
n.a. Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; TAIR: AT3G59380.1 farnesyltransferase A; Swiss-Prot: sp|O24304|FNTA_PEA Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; TrEMBL-Plants: tr|G7IHS5|G7IHS5_MEDTR Protein prenyltransferase alpha subunit repeat protein; Found in the gene: LotjaGi3g1v0294100 LjG1.1_chr3 60141726 60145698 -
3 domain predictions
2 GO terms