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Lj0g3v0089819.1

Overview

Field Value
Gene ID Lj0g3v0089819
Transcript ID Lj0g3v0089819.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: thymidine kinase-like [Cicer arietinum] gi|502134616|ref|XP_004502182.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11441:SF2
1 214 214 6.10E-134 –
PANTHER
PTHR11441
1 214 214 6.10E-134
IPR001267
PIRSF
PIRSF035805
10 204 195 1.30E-60
IPR001267
Pfam
PF00265
13 191 179 1.60E-53
IPR001267
SUPERFAMILY
SSF52540
13 151 139 7.45E-38
IPR027417
SUPERFAMILY
SSF57716
151 194 44 1.43E-09 –
Gene3D
G3DSA:3.30.60.20
151 193 43 9.30E-16 –
ProSitePatterns
PS00603
178 191 14 –
IPR020633

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004797
Molecular function Thymidine kinase activity Catalysis of the reaction: ATP + thymidine = ADP + thymidine 5'-phosphate.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of

Genome browser

LORE1 insertions 12

Expression data

Expression pattern

Expression pattern of Lj0g3v0089819.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0089819.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.