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Lj0g3v0104479.1

Overview

Field	Value
Gene ID	Lj0g3v0104479
Transcript ID	Lj0g3v0104479.1
Lotus japonicus genome version	MG20 v3.0
Description	PREDICTED: protein LONGIFOLIA 1-like [Cicer arietinum] gi\|502178002\|ref\|XP_004516159.1\|
Working Lj name	n.a.

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Prediction algorithm	Identifier	Start	End	Length	E-value	InterPro ID
PANTHER	PTHR31680 View details on PTHR31680 Search for proteins/transripts with this domain View external data on PTHR31680	2	1096	1095	0	IPR033334 Show description in modal box View details on IPR033334 Search for proteins/transripts with this domain View on EBI InterPro Service
PANTHER	PTHR31680:SF3 View details on PTHR31680:SF3 Search for proteins/transripts with this domain View external data on PTHR31680:SF3	2	1096	1095	0	–
MobiDBLite	mobidb-lite View details on mobidb-lite Search for proteins/transripts with this domain	38	72	35	–	–
MobiDBLite	mobidb-lite View details on mobidb-lite Search for proteins/transripts with this domain	231	263	33	–	–
MobiDBLite	mobidb-lite View details on mobidb-lite Search for proteins/transripts with this domain	287	322	36	–	–
Pfam	PF14383 View details on PF14383 Search for proteins/transripts with this domain View external data on PF14383	319	339	21	1.30E-07	IPR032795 Show description in modal box View details on IPR032795 Search for proteins/transripts with this domain View on EBI InterPro Service
MobiDBLite	mobidb-lite View details on mobidb-lite Search for proteins/transripts with this domain	336	438	103	–	–
MobiDBLite	mobidb-lite View details on mobidb-lite Search for proteins/transripts with this domain	477	534	58	–	–
MobiDBLite	mobidb-lite View details on mobidb-lite Search for proteins/transripts with this domain	574	750	177	–	–
MobiDBLite	mobidb-lite View details on mobidb-lite Search for proteins/transripts with this domain	810	831	22	–	–
Pfam	PF14309 View details on PF14309 Search for proteins/transripts with this domain View external data on PF14309	889	1073	185	1.10E-38	IPR025486 Show description in modal box View details on IPR025486 Search for proteins/transripts with this domain View on EBI InterPro Service

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0051513 View details of GO:0051513 AmiGO InterPro QuickGO	Biological process	Regulation of monopolar cell growth	Any process that modulates the frequency, rate or extent of monopolar cell growth, polarized growth from one end of a cell.	Subterm of View details of GO:0051510 Regulates View details of GO:0042814

Genome browser

Expression data

Expression pattern

Expression pattern of Lj0g3v0104479.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0104479.1, powered by CORGI.

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