Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj0g3v0105429.1

Overview

Field Value
Gene ID Lj0g3v0105429
Transcript ID Lj0g3v0105429.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: anthranilate N-methyltransferase-like [Glycine max] gi|356520217|ref|XP_003528760.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius
CYTOPLASMIC_DOMAIN
1 310 310 – –
ProSiteProfiles
PS51683
1 336 336 62.473
IPR016461
PIRSF
PIRSF005739
19 336 318 7.20E-112
IPR016461
SUPERFAMILY
SSF46785
21 91 71 6.05E-15
IPR011991
Gene3D
G3DSA:1.10.10.10
22 88 67 5.90E-18
IPR011991
PANTHER
PTHR11746
23 336 314 3.40E-168 –
PANTHER
PTHR11746:SF103
23 336 314 3.40E-168 –
Pfam
PF08100
25 56 32 2.00E-07
IPR012967
SUPERFAMILY
SSF53335
94 335 242 1.13E-59
IPR029063
Gene3D
G3DSA:3.40.50.150
96 336 241 2.10E-68
IPR029063
Pfam
PF00891
103 322 220 1.20E-74
IPR001077
Phobius
TRANSMEMBRANE
311 332 22 – –
Phobius
NON_CYTOPLASMIC_DOMAIN
333 336 4 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008171
Molecular function O-methyltransferase activity Catalysis of the transfer of a methyl group to the oxygen atom of an acceptor molecule.
Subterm of
GO:0046983
Molecular function Protein dimerization activity The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.
Subterm of

Genome browser

LORE1 insertions 14

Expression data

Expression pattern

Expression pattern of Lj0g3v0105429.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0105429.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.